DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and golg-4

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001355507.1 Gene:golg-4 / 175445 WormBaseID:WBGene00010306 Length:1642 Species:Caenorhabditis elegans


Alignment Length:1791 Identity:353/1791 - (19%)
Similarity:742/1791 - (41%) Gaps:403/1791 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 LKDKLAKK--KIKNESQLVLQELEGRIKRDMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPV 398
            ||::|..:  |:|..:|...::|             :|.:..||.....:     .:||:..|.:
 Worm     5 LKNRLDNEAGKLKQSAQQYGEQL-------------AAQVGQYRQAMNEQ-----PAGSDASASI 51

  Fly   399 LA--LPEPEESRLPRPSK---------LTNLPKPLFQRRGIAPKAKGICKTLKEKRLQTDNMDTM 452
            ..  ..|..|::...|:.         ::.:|:......|::.     .::...:|.::.:.|::
 Worm    52 SKRFTGESGETKAENPANTSIESSSAIMSEIPEADLLGLGLSS-----TESPSNRRRRSPSEDSI 111

  Fly   453 PGRAKQLGRETASRIPSVMMSKKYQESVPNCDAPQTEISALT-------ASNQVAKETI----EK 506
            ......|.....| ||:.:.|.  .|::|: |:......|.:       |.|...|:.:    .|
 Worm   112 HSNESTLAALLQS-IPNAISSA--LETIPS-DSESVASDAFSVRSTNDPAYNSRLKQRLATYKAK 172

  Fly   507 YEEQV-------------KRLKET--------IERLEME---------------NGKAVNLGEQF 535
            |.:.|             ::|.||        :|:|.:|               :||. .|.::.
 Worm   173 YRDAVHRHNKLVDDVNTTRKLLETTQDECLQKVEKLRLEKRILAEKLSNSAGNGDGKE-ELEKKC 236

  Fly   536 ETHKAKSKQMEEELLSSISEKDSTIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNK 600
            |.:|...:|.:.::.|...:|..     ||.|..:..|   :|.:.::|.|...::.:.|...|:
 Worm   237 EDYKRMLEQCKIKIKSLQQDKKE-----QQQLITVDND---DSVDPRIREMEQRIQKTEEEWTNR 293

  Fly   601 CLELERLLPLASASGLDSVACQFDQLRSEIAATRMKLESMLSTFSHASCEVSQKTTDCKRLSEQI 665
            ..|.::                  |....:|.|:.::.:.|   .:...|:.|....|..|.:|.
 Worm   294 INESDQ------------------QHAINLATTKAEMHAAL---ENKDSEIEQWRRKCATLEQQD 337

  Fly   666 STAHDDFGQLQEKYNNLKHKWSSQKLAIDTMQVDYNTIQQKYLQLQDEYRHLELRSD--EQCQQL 728
            :.|:..:....||...:.....|:|..:.....:......|.:..::|.:..|:.:|  ::.::|
 Worm   338 ADANQRWSDKVEKVQAMNKALESEKNEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERL 402

  Fly   729 QDENSKLQAEIGTLKERVEEIHSELLEVPNPDTHPEDMELQ-----NQELKKRLSKLQWEFDEIQ 788
            ::|..|::.|:.|.|.::|...|...:....|.....:||.     ..:|:.|:::....|:   
 Worm   403 KEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFE--- 464

  Fly   789 LNYECLSNELMST--------IQECDALREEHKQRTTNSDLESMKSSGVGTECSDPENELDTDLL 845
             ||...:.:.::.        :.|||..||::::|...|  |.:.:....|:      |.|...:
 Worm   465 -NYRSEAEKTLAAAKAQFEKMVSECDKWREKYEERAAAS--EHIATVEFETQ------ETDAHRI 520

  Fly   846 QQFTKLSKSIQQ--IELTDYSGGRRLFIYNHAEQDQSVPSLKLCLEPAKYLEGDGKQHDASDSVF 908
            .:|....|::.:  .|||        ..:..|:::::....:|.....:.||             
 Worm   521 LEFEAEKKALAEKCEELT--------LKFEQADKEKNEMVQQLSRLQQEMLE------------- 564

  Fly   909 LKGFLKCQRFQIVKINQEQNLVKEEDRMRDIIFQLKQEVDGK----KNLIEEEKEVINNLRAQIT 969
                 ||...| .::|:.:.|.:|.....|.:.|..:.:.|:    |.::|.||:...|.:.|..
 Worm   565 -----KCDALQ-AEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQER 623

  Fly   970 SLNQIETIKNQNAKTKILCEELQTKDTVQTANKQESQEVLTLKTSLAHLKSKVCELQK-----KL 1029
            .....:.::..|::..||       |.|....:|..:|||..:.::..|..|:.|.:|     |.
 Worm   624 EEQLAKAMEKLNSEQNIL-------DEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKT 681

  Fly  1030 EKQSEDEKISELQSDIGEISECCLSMELKLADIVNWQAEELRPLDQ-LQE-----SGVELQH--- 1085
            |.::..:|:...::.:.|.|:...:|:::|.:....:.|.:..|.| |:|     |.||:|.   
 Worm   682 ELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLL 746

  Fly  1086 -HSTT------AEESLNVEKPIQE------------QTERTLTTEYE----RRIEQLEESLQRAQ 1127
             .|||      ||.:..|:|.::|            :.||.|.|..|    ..|.::.:.::.|:
 Worm   747 LESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAK 811

  Fly  1128 EELSILEKRKTD---------------------ENKSLQLEYMAKI-ETSENEN--RSKFRAYCL 1168
            :||...||.|::                     ..|:.:|| |||| :::|:|.  |.:......
 Worm   812 KELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELE-MAKIAKSTEDEKLAREQLAGELE 875

  Fly  1169 DLKETQKRYEEQLQQTNEKLASVTTQCQVHLDVIKRSLQEKITQAEKERNELAVRHKAELEKIRE 1233
            :.||..|..||:.....::........:..:.|:|..| |:...|.:...|||...||  :||:|
 Worm   876 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQL-ERAQSALESSQELASSQKA--DKIQE 937

  Fly  1234 TLKEKESSYKEKLRQAEEERDKEISRLEVMRNTIAELHKTNSDREV---ELEGVKMEKCQLKKLY 1295
            ..||.:::.|....:.|...       |::|:..|.|..:||:.|:   :||.:..| .|.::..
 Worm   938 LEKELQNAQKRSSEELETAN-------EMVRSLTATLENSNSETEILKQKLETLDKE-LQARQQT 994

  Fly  1296 DKSML-ELEQLQCTADQKSSDLLPGSSNENIDDLQKKCDQYVQDLELLRGEKAELLSEIQKINGQ 1359
            :|::. |:..|..:..:|.      .....|.:||.:    :..:|:.:.||.||:....:...|
 Worm   995 EKALTEEINVLTTSLAEKE------QQTAQIQNLQTQ----IYQMEVEKEEKVELVKVQLQQAAQ 1049

  Fly  1360 HSNTIK-----KLEEIEAEMITLTTQKELERCEIAEKLETFKSKEADIKEALHCAQLRLHAYDKL 1419
            .|::.:     ::|::||::      |.:|:.: ||.|.:..:::..::..||  ||.:...:||
 Worm  1050 SSSSAEEALRAEIEQLEAKL------KAVEQAK-AEALNSLLAEKEHLQAQLH--QLGVEKEEKL 1105

  Fly  1420 VCEYERLKGCLSDSNKLSENLQKKVERLHA--------EQLALQEGISGRD---SEIKQLRSELK 1473
            .....:|:.....|:.:.:.|:.::|:|.|        ::.||...::.::   ::|::|:::|.
 Worm  1106 EMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLH 1170

  Fly  1474 D-AIDENKTVREAKVGLENSLKAVQENMSAQEGQFKQKIADIKGSVDELQIKLKSLQEVRDHLES 1537
            . .:::.:.:...||.|:   :|.|.:.|.::.        ::..:::|:.||:.:::.:....|
 Worm  1171 QLEVEKEEKLEMVKVQLQ---QAAQSSSSVEQA--------LRAEIEKLEAKLQEIEKAKMQNSS 1224

  Fly  1538 RNEELKRKLKDAQELQNM--VDKERKLNSSLREDFDKL-----------EQTKLDLEE-QLRAKK 1588
            :.|:..|:|.:..|...:  :.|| |:.|.||.:...:           |:||:|..| :.|.|:
 Worm  1225 KREQKVRELSNLNEKMRVEFIAKE-KIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKR 1288

  Fly  1589 VEIDRRSKELGEV------TKDCENIRSDLEAQTNDFLKERETLNLTISDLRLHNEQLLETSKNY 1647
            ...||.::::.|:      .|:.|.:.|.||.:...:.:.:.:....|:.|....|:.|:.::|.
 Worm  1289 ATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNS 1353

  Fly  1648 LSDIT---------AANNLNLEMKKNLHDLTKECKSLRSDLQS---KE-------EYFQTQKQLL 1693
            ..:.:         :|....||.::.|..|.:..||..|:::.   ||       .:::.:|::|
 Worm  1354 QDEASESRFKTLEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEML 1418

  Fly  1694 DETISNLKEENRKME---EKLSSGN--KALKEDCEKLRSTLESKELILQQNKQELEERLTVINEK 1753
            :.....|.:....:|   :||::.|  ||:|.|.:..:        ::::.::|:::....:|:|
 Worm  1419 EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARK--------VVRELQKEVKQLYNELNDK 1475

  Fly  1754 NGKNALLDAQLKSNETAFTSLRKAWIKQSLAIEAANKRS--------LEMEQKVDKRTREYEELR 1810
            |.:..::..:|...:|:..:.....::....::..::||        ..::||:|....|.::||
 Worm  1476 NQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEFSFKEEIASLKQKLDASLTEADDLR 1540

  Fly  1811 STLKTREINFRSEKERMDGTISSL----------LEDKRNLEEKLCTVTELLAK----------- 1854
            ..:...|...||......|...|:          .|..||:..:..|..|.|.|           
 Worm  1541 MQVSRNEKTPRSNGNASTGRTKSMELHGIADPAEAEYLRNVLYRYMTNRESLGKESVTLARVIGT 1605

  Fly  1855 --------LKRELPALHTQKVN-----GGDVSIELN 1877
                    :|..:.:..:::.:     ||.||..||
 Worm  1606 VARFDESQMKNVISSEESRQASWAAAVGGTVSHALN 1641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526
Motor_domain 8..310 CDD:277568
SMC_prok_B <471..1270 CDD:274008 188/927 (20%)
Mplasa_alph_rch 924..1647 CDD:275316 182/828 (22%)
CENP-H 1204..>1266 CDD:283493 17/61 (28%)
CALCOCO1 <1489..1850 CDD:285171 82/422 (19%)
golg-4NP_001355507.1 DUF3584 207..>884 CDD:378817 151/753 (20%)
SMC_prok_B 577..1442 CDD:274008 198/914 (22%)
SH3_and_anchor <1444..1549 CDD:275056 19/112 (17%)
Grip 1572..1620 CDD:197860 8/47 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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