DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and Kif5b

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_032474.2 Gene:Kif5b / 16573 MGIID:1098268 Length:963 Species:Mus musculus


Alignment Length:1153 Identity:288/1153 - (24%)
Similarity:489/1153 - (42%) Gaps:294/1153 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIQVCIKVRPCEPGLTSLWQVKEG----------RSIQLADSHAEPYVFDYVFDEGASNQEVFDR 62
            :|:|..:.||....     :|..|          .::.:|   ::||.||.||....|.::|::.
Mouse     8 NIKVMCRFRPLNES-----EVNRGDKYVAKFQGEDTVMIA---SKPYAFDRVFQSSTSQEQVYND 64

  Fly    63 MAKHIVHACMQGSNGTIFAYGQTSSGKTYTMMG---DEQNPGVMVLAAKEIFQQISSETER-DFL 123
            .||.||...::|.|||||||||||||||:||.|   |.:..|::....::||..|.|..|. :|.
Mouse    65 CAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFH 129

  Fly   124 LRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCKESIVTSEDDLLRQLYMGNKERVVGE 187
            ::|.|.|||.:||.|||:....:|.:||..|.:..| .|.|..|.|.|:::..:..|...|.|..
Mouse   130 IKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAV 194

  Fly   188 TNMNERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPA-------DHA----S 241
            |||||.|||||:||.|.:   |.:::..:......|.||||||||:|...       |.|    .
Mouse   195 TNMNEHSSRSHSIFLINV---KQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINK 256

  Fly   242 SLMIFRNLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLTSIICTITPSFVEES--SSTISFG 304
            ||....|::.:|:|.....|  :||||:.||:..|||||..|:|:...:||...||  .||:.||
Mouse   257 SLSALGNVISALAEGSTYVP--YRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFG 319

  Fly   305 TCAKKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNES-QLVLQELEGRIKRDMLKIV 368
            ..||.|  |..|| ::.|.|        ....|.|..|:|.||:: :..:|.||..:.|  .:..
Mouse   320 QRAKTI--KNTVC-VNVELT--------AEQWKKKYEKEKEKNKTLRNTIQWLENELNR--WRNG 371

  Fly   369 SSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPKPLFQRRGIAPKAK 433
            .:..:|:...:::......||     |..:....:...:.:......|:.     :||....:..
Mouse   372 ETVPIDEQFDKEKANLEAFTA-----DKDIAITSDKPAAAVGMAGSFTDA-----ERRKCEEELA 426

  Fly   434 GICKTLKEKRLQTDNMDTMPGRAK--QLGRETASRIPSVMMSKKYQESVPNCDAPQTEISALTAS 496
            .:.|.|.:|..:.:....:..:.|  .|.:|      .::.|.:..:     |..|.|::.|.|.
Mouse   427 KLYKQLDDKDEEINQQSQLVEKLKTQMLDQE------ELLASTRRDQ-----DNMQAELNRLQAE 480

  Fly   497 NQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEELLS-SISEKDSTI 560
            |..:|       |:||.:.:.:|.|      |||..:  ::.:.:.|..|.|||| .:::|.:|:
Mouse   481 NDASK-------EEVKEVLQALEEL------AVNYDQ--KSQEVEDKTKEYELLSDELNQKSATL 530

  Fly   561 VSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELERLLPLASASGLDSV-----A 620
            .|:...|::|..  :.|.::.:...|...|             |:.|..:..|.|.:.|     .
Mouse   531 ASIDAELQKLKE--MTNHQKKRAAEMMASL-------------LKDLAEIGIAVGNNDVKQPEGT 580

  Fly   621 CQFDQLRSEIAATRMKLESMLSTFSHASCEVSQKTTDCKRLSEQISTAHDDFGQLQEKYNNLKHK 685
            ...|:   |....|:.:..|.|       ||......||:|.   ||         :..:|.|.:
Mouse   581 GMIDE---EFTVARLYISKMKS-------EVKTMVKRCKQLE---ST---------QTESNKKME 623

  Fly   686 WSSQKLAIDTMQVDYNTIQQK----YLQ-LQDEYRHLELRSDEQCQQLQDENSKLQAEIGTLKER 745
            .:.::||...:::..:..:.|    ||| ::.:.|.||    |....|.:|..:|:|:       
Mouse   624 ENEKELAACQLRISQHEAKIKSLTEYLQNVEQKKRQLE----ESVDSLGEELVQLRAQ------- 677

  Fly   746 VEEIHSELLEVPNPDTHPEDMELQNQELKKRLSKLQWEFDEIQLNYECLSNELMSTI-QECDALR 809
             |::|              :||      |:.|:|:|            .:||:...: |:..:.|
Mouse   678 -EKVH--------------EME------KEHLNKVQ------------TANEVKQAVEQQIQSHR 709

  Fly   810 EEHKQRTTNSDLESMKSSGVGTECSDPENELDTDLLQQFTKLSKSIQQIELTDYSGGRRLFIYNH 874
            |.|:::     :.|::..      .:.:.:|.|||                              
Mouse   710 ETHQKQ-----ISSLRDE------VEAKEKLITDL------------------------------ 733

  Fly   875 AEQDQSVPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVKINQEQN-LVKEEDRMRD 938
              |||   :.|:.||..:                    |:.:..::...:||:: .:.|...|:|
Mouse   734 --QDQ---NQKMVLEQER--------------------LRVEHERLKATDQEKSRKLHELTVMQD 773

  Fly   939 IIFQLKQEVDGKKNLIEEEKEVINNLRAQITSLNQIETIKNQNAKTKI-LCEELQTKDTVQTANK 1002
            ...|.:|::.|.:..:.:|.:.::|||....          |:..|:: ...|:.:.||..:|  
Mouse   774 RREQARQDLKGLEETVAKELQTLHNLRKLFV----------QDLATRVKKSAEVDSDDTGGSA-- 826

  Fly  1003 QESQEVLTLKTSLAHLKSKV------------CELQKKLEK--QSEDEKISELQSDIGEISECCL 1053
            .:.|::..|:.:|..| :||            ||| .||||  ::..|::..|:|.:.|..|.. 
Mouse   827 AQKQKISFLENNLEQL-TKVHKQLVRDNADLRCEL-PKLEKRLRATAERVKALESALKEAKENA- 888

  Fly  1054 SMELKLADIVNWQAEELRPLDQLQESGVELQHHSTTAEESLNVEKPIQ 1101
            |.:.|     .:|.|..|..:.::...:..:.||.      .:.|||:
Mouse   889 SRDRK-----RYQQEVDRIKEAVRSKNMARRGHSA------QIAKPIR 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 126/335 (38%)
Motor_domain 8..310 CDD:277568 124/329 (38%)
SMC_prok_B <471..1270 CDD:274008 135/659 (20%)
Mplasa_alph_rch 924..1647 CDD:275316 46/194 (24%)
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
Kif5bNP_032474.2 KISc_KHC_KIF5 6..325 CDD:276820 124/329 (38%)
KISc 8..332 CDD:214526 128/339 (38%)
DUF4337 <462..>538 CDD:290935 25/95 (26%)
TACC 467..662 CDD:282818 57/255 (22%)
TMPIT 598..>686 CDD:285135 28/138 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 908..963 5/24 (21%)
Globular 915..963 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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