DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cana and kif5b

DIOPT Version :9

Sequence 1:NP_001027247.1 Gene:cana / 3771934 FlyBaseID:FBgn0040233 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001122126.1 Gene:kif5b / 100038146 XenbaseID:XB-GENE-854737 Length:962 Species:Xenopus tropicalis


Alignment Length:1167 Identity:292/1167 - (25%)
Similarity:477/1167 - (40%) Gaps:326/1167 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIQVCIKVRPCEPGLTSLWQVKEG----RSIQLADS---HAEPYVFDYVFDEGASNQEVFDRMAK 65
            ||:|..:.||....     :|..|    ...|..|:   .::|||||.||....|.::|::..||
 Frog     8 SIKVMCRFRPLNDS-----EVTRGDKYVAKFQGEDTVVMASKPYVFDRVFQSNTSQEQVYNACAK 67

  Fly    66 HIVHACMQGSNGTIFAYGQTSSGKTYTMMGDEQNP---GVMVLAAKEIFQQISSETER-DFLLRV 126
            .||...:.|.|||||||||||||||:||.|...:|   |::....::||..|.|..|. :|.::|
 Frog    68 AIVKDVLDGYNGTIFAYGQTSSGKTHTMEGKLHDPDGMGIIPRIVQDIFNYIYSMDENLEFHIKV 132

  Fly   127 GYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCKESIVTSEDDLLRQLYMGNKERVVGETNM 190
            .|.|||.:||.|||:....:|.:||..|.:..| .|.|..|.|.|:::..:..|...|.|..|||
 Frog   133 SYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNM 197

  Fly   191 NERSSRSHAIFRIIIESRKSDHSDNDTVKQSVLSLVDLAGSEQVDPA-------DHA----SSLM 244
            ||.|||||:||.|.:   |.:::..:......|.||||||||:|...       |.|    .||.
 Frog   198 NEHSSRSHSIFLINV---KQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLS 259

  Fly   245 IFRNLVKSLSESVDSKPNSFRDSKLPRIMLPSLGGNVLTSIICTITPSFVE--ESSSTISFGTCA 307
            ...|::.:|:|.....|  :||||:.||:..|||||..|:|:...:||...  ||.||:.||..|
 Frog   260 SLGNVISALAEGSVYIP--YRDSKMTRILQDSLGGNCRTTIVICCSPSAYNEAESKSTLLFGQRA 322

  Fly   308 KKIRCKPQVCKIDSETTMMRQLDRGISMLKDKLAKKKIKNES-QLVLQELEGRIKR--------- 362
            |.|  |..|| ::.|.|        ....|.|..|:|.|.:| :..:|.||..:.|         
 Frog   323 KTI--KNTVC-VNVELT--------AEQWKKKYEKEKEKTKSLRSTVQWLENELNRWRKGETVPI 376

  Fly   363 ----DMLKIVSSASLDDYRLQKRRRTWTLTASGSEGDAPVLALPEPEESRLPRPSKLTNLPKPLF 423
                |..|....|.:.|..:...:...||.|:.::.:            |.....::|.|.|.|.
 Frog   377 EEQYDKEKANMDAFVVDNFVNNEKPAVTLAANFTDAE------------RRKCEEEVTKLYKQLD 429

  Fly   424 QRRGIAPKAKGICKTLKEKRLQTDNMDTMPGRAKQLGRETASRIPSVMMSKKYQESVPNCDAPQT 488
            .:.....:...:.:.||::.|..:.:                    :..:::.|:::      |.
 Frog   430 DKDEEINQQSQLVEKLKQQMLDQEEL--------------------LASTRRDQDNM------QA 468

  Fly   489 EISALTASNQVAKETIEKYEEQVKRLKETIERLEMENGKAVNLGEQFETHKAKSKQMEEELLS-S 552
            |::.|.|.|..:|       |:||.:.:.:|.|      |||..::.:..:.|||  |.::|| .
 Frog   469 ELNRLQAENDASK-------EEVKEVLQALEEL------AVNYDQKSQEVEDKSK--EYDILSEE 518

  Fly   553 ISEKDSTIVSLQQSLEELSRDVLRNSKEDQMRSMCPELESSCERICNKCLELERLLPLASASG-- 615
            :::|...:.|:...|::|..  :.|.::.:...|...|             |:.|..:..|.|  
 Frog   519 LNQKSVILSSIDSELQKLKE--MTNHQKKRATEMMTSL-------------LKDLAEIGIAVGGN 568

  Fly   616 ---LDSVACQFDQLRSEIAATRMKLESMLSTFSHASCEVSQKTTDCKRLSEQISTAHDDFGQLQE 677
               ...|:...|:   |....|:.:..|.|       ||......||:|.          |...|
 Frog   569 DGKQPEVSGMIDE---EFTVARLYISKMKS-------EVKTMVKRCKQLE----------GTQSE 613

  Fly   678 KYNNLKHKWSSQKLAIDTMQVDYNTIQQK----YLQ-LQDEYRHLELRSDEQCQQLQDENSKLQA 737
              :|.|.:.:.::||...:::..:..:.|    |:| ::.:.||||    |....|.:|..||:|
 Frog   614 --SNKKMEENEKELAACQLRISQHEAKIKSLTEYVQNVEQKKRHLE----ESVDSLNEELVKLRA 672

  Fly   738 EIGTLKERVEEIHSELLEVPNPDT---HPEDMELQN--QELKKRLSKLQWEFDEIQLNYEC---L 794
            :     |:|.|:..|.|......|   |..:.::|:  :..:|:||.|:   |||:...:.   |
 Frog   673 Q-----EKVHEMEKEHLNKVQTATEVKHAVEEQIQSHRETHQKQLSALR---DEIETKEKVITEL 729

  Fly   795 SNELMSTIQECDALREEHKQRTTNSDLESMKSSGVGTECSDPENELDTDLLQQFTKLSKSIQQIE 859
            .::....:.|.:.||.||         |.:|                                  
 Frog   730 QDQNQKMVLEQERLRVEH---------EKLK---------------------------------- 751

  Fly   860 LTDYSGGRRLFIYNHAEQDQSVPSLKLCLEPAKYLEGDGKQHDASDSVFLKGFLKCQRFQIVKIN 924
                          :|:|::|                 .|.|:                      
 Frog   752 --------------YADQEKS-----------------KKLHE---------------------- 763

  Fly   925 QEQNLVKEEDRMRDIIFQLKQEVDGKKNLIEEEKEVINNLRAQITSLNQIETIKNQNAKTKI-LC 988
                |...:||..    |.:|::.|.:..:.:|.:.::|||....          |:..|:: ..
 Frog   764 ----LTVMQDRRE----QARQDLKGLEETVAKELQTLHNLRKLFV----------QDLTTRVKKS 810

  Fly   989 EELQTKDTVQTANKQESQEVLTLKTSLAHLKSKV------------CELQKKLEK--QSEDEKIS 1039
            .|:.:.||..:|  .:.|::..|:.:|..| :||            ||| .||||  ::..|::.
 Frog   811 AEMDSDDTGGSA--AQKQKISFLENNLEQL-TKVHKQLVRDNADLRCEL-PKLEKRLRATAERVK 871

  Fly  1040 ELQSDIGEISECCLSMELKLADIVNWQAEELRPLDQLQESGVELQHHSTTAEESLNVEKPIQ 1101
            .|:|.:.|..|.. |.:.|     .:|.|..|..:.::...:..:.||.      .:.|||:
 Frog   872 ALESALKEAKENA-SRDRK-----RYQQEVDRIKEAVRSKNMARRGHSA------QIAKPIR 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canaNP_001027247.1 KISc 8..316 CDD:214526 129/332 (39%)
Motor_domain 8..310 CDD:277568 127/326 (39%)
SMC_prok_B <471..1270 CDD:274008 134/665 (20%)
Mplasa_alph_rch 924..1647 CDD:275316 44/193 (23%)
CENP-H 1204..>1266 CDD:283493
CALCOCO1 <1489..1850 CDD:285171
kif5bNP_001122126.1 KISc_KHC_KIF5 6..325 CDD:276820 127/326 (39%)
Smc <409..792 CDD:224117 105/588 (18%)
COG4372 709..>914 CDD:226809 60/331 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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