DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGRP-LD and PGLYRP1

DIOPT Version :10

Sequence 1:NP_001137893.1 Gene:PGRP-LD / 3771920 FlyBaseID:FBgn0260458 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_005082.1 Gene:PGLYRP1 / 8993 HGNCID:8904 Length:196 Species:Homo sapiens


Alignment Length:203 Identity:53/203 - (26%)
Similarity:87/203 - (42%) Gaps:28/203 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 RSVGLLVMCASALALAAYLLWRQTQTPDFGYRLSIVGHGIWSDMELQGRGTLFDPIGVGTVIFTH 201
            ||:.|.....|.|.|.|     ..:|.|......||....|..:..:....|..|:..  |:.:|
Human     4 RSMLLAWALPSLLRLGA-----AQETEDPACCSPIVPRNEWKALASECAQHLSLPLRY--VVVSH 61

  Fly   202 TGSNECHD--DCPDVLHKLERSHVG-----ELPYNFLVAGDCQVFEAQGWHYRSQYPRDLNGIDS 259
            |..:.|:.  .|......::..|:.     ::.||||:..|..|:|.:||::...:...|....|
Human    62 TAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGHLWNPMS 126

  Fly   260 LVMAFVGNFSGRPPIDCQLMAAQALILESLKRRILQPIYQLFVLGSYTDALQREL---------- 314
            :.::|:||:..|.|....:.|||.|:...:.:..|:..|   ||..:.| :||.|          
Human   127 IGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNY---VLKGHRD-VQRTLSPGNQLYHLI 187

  Fly   315 RHWPHYAS 322
            ::||||.|
Human   188 QNWPHYRS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LDNP_001137893.1 PGRP 169..306 CDD:128941 35/143 (24%)
PGLYRP1NP_005082.1 PGRP 31..173 CDD:128941 36/147 (24%)

Return to query results.
Submit another query.