Protein Alignment PGRP-LD and Pglyrp1

DIOPT Version :10

• Sequence 1: NP_001137893.1
• Gene: PGRP-LD / 3771920
• FlyBaseID: FBgn0260458
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_445825.1
• Gene: Pglyrp1 / 84387
• RGDID: 621429
• Length: 183
• Species: Rattus norvegicus
• Alignment Length: 165
• Identity: 41/165 - (24%)
• Similarity: 71/165 - (43%)
• Gaps: 19/165 - (11%)

  Fly   171 IVGHGIWSDMELQGRGTLFDPIGVGTVIFTHTGSNECH--DDCPD-----VLHKLERSHVGELPY 228
            :|....|..:..:....|..|  |..|:.:||..:.|.  |.|..     .|:::::....::.|
  Rat    21 VVPRSEWKALPSECSKGLKKP--VRYVVISHTAGSFCSSPDSCEQQARNVQLYQMKQLGWCDVAY 83

  Fly   229 NFLVAGDCQVFEAQGWHYRSQYPRDLNGIDSLVMAFVGNFSGRPPIDCQLMAAQALILESLKRRI 293
            |||:..|..|:|.:||..:..:...:....|:.:.|:|::|.|.|....|.||..|:...:....
  Rat    84 NFLIGEDGHVYEGRGWTIKGDHTGPIWNPMSIGITFMGDYSHRVPAKRALRAALNLLKCGVSEGF 148

  Fly   294 LQPIYQLFVLG--------SYTDALQRELRHWPHY 320
            |:..|:  |.|        |..|.|...::.|.||
  Rat   149 LRSNYE--VKGHRDVQSTLSPGDQLYEIIQSWDHY 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LD	NP_001137893.1	PGRP	169..306	CDD:128941	35/149 (23%)
Pglyrp1	NP_445825.1	PGRP	21..161	CDD:128941	35/143 (24%)