Protein Alignment PGRP-LD and PGRP-SB1

DIOPT Version :10

• Sequence 1: NP_001137893.1
• Gene: PGRP-LD / 3771920
• FlyBaseID: FBgn0260458
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_648917.1
• Gene: PGRP-SB1 / 39870
• FlyBaseID: FBgn0043578
• Length: 190
• Species: Drosophila melanogaster
• Alignment Length: 196
• Identity: 52/196 - (26%)
• Similarity: 84/196 - (42%)
• Gaps: 32/196 - (16%)

  Fly   139 VGLLVMCASALALAAYLLWRQTQTPDFGYRLSIVGHGIWSDMELQGRGTLFDPIGVGTVIFTHTG 203
            |..||:|..||:..|               |.|.....|..:..:....:..  .|..||..|:.
  Fly    10 VAALVLCCLALSANA---------------LQIEPRSSWGAVSARSPSRISG--AVDYVIIHHSD 57

  Fly   204 S-NEC--HDDCPDVLHKLERSHVG-----ELPYNFLVAGDCQVFEAQGWHYRSQYPRDLNGIDSL 260
            : |.|  .:.|..::..::..|.|     ::.|||:||||.:|:|.:|:..:..:..:.|. .|:
  Fly    58 NPNGCSTSEQCKRMIKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNR-KSI 121

  Fly   261 VMAFVGNFSGRPPIDCQLMAAQALILESLKRRILQPIYQLF------VLGSYTDALQRELRHWPH 319
            .:.|:|||....|....|..|:.||..:.:|..|:..|.||      ......|||..|::.|||
  Fly   122 GIVFIGNFERSAPSAQMLQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPH 186

  Fly   320 Y 320
            :
  Fly   187 W 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LD	NP_001137893.1	PGRP	169..306	CDD:128941	38/150 (25%)
PGRP-SB1	NP_648917.1	PGRP	25..167	CDD:128941	38/144 (26%)