DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LD and Pglyrp4

DIOPT Version :10

Sequence 1:NP_001137893.1 Gene:PGRP-LD / 3771920 FlyBaseID:FBgn0260458 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001159440.1 Gene:Pglyrp4 / 384997 MGIID:2686324 Length:375 Species:Mus musculus


Alignment Length:59 Identity:15/59 - (25%)
Similarity:21/59 - (35%) Gaps:15/59 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 ETAALIAK---------GKGTLRPGGSSSFMYSGSQMMGRPES---LTSADNSNFPTFL 465
            ||..||.|         ||.||   |.....:...|.:.:.:.   ....|..|||.::
Mouse   135 ETTCLIGKLLDHFDSEHGKDTL---GVPLLDHERIQQIWKEQQKHIQCIQDPENFPLYM 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LDNP_001137893.1 PGRP 169..306 CDD:128941
Pglyrp4NP_001159440.1 PGRP 58..192 CDD:128941 15/59 (25%)
PGRP 213..353 CDD:128941
Interaction with murein. /evidence=ECO:0000250 295..304
Interaction with murein. /evidence=ECO:0000250 355..356
Blue background indicates that the domain is not in the aligned region.

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