Protein Alignment PGRP-LD and PGRP-SC1a

DIOPT Version :10

• Sequence 1: NP_001137893.1
• Gene: PGRP-LD / 3771920
• FlyBaseID: FBgn0260458
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_610407.1
• Gene: PGRP-SC1a / 35859
• FlyBaseID: FBgn0043576
• Length: 185
• Species: Drosophila melanogaster
• Alignment Length: 199
• Identity: 48/199 - (24%)
• Similarity: 87/199 - (43%)
• Gaps: 44/199 - (22%)

  Fly   142 LVMCASALALAAYLLWRQTQTPDFGYRLSIVGHGIWSDMELQGRGTLFDPIGVGT----VIFTHT 202
            :::|:..:|...|::                     |..|..|||..: .:|:|.    .|..||
  Fly    11 VLVCSQYMAQGVYVV---------------------SKAEWGGRGAKW-TVGLGNYLSYAIIHHT 53

  Fly   203 GSNECHD--DCPDVLHKLERSHVG-----ELPYNFLVAGDCQVFEAQGWHYRSQYPRDLNGIDSL 260
            ..:.|..  .|..||..::..|:.     ::.||||:.||..|:|.:||:....:..:.|.. |:
  Fly    54 AGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPY-SI 117

  Fly   261 VMAFVGNFSGRPPIDCQLMAAQALILESLKRRILQPIYQLFVLG----SYTDA----LQRELRHW 317
            .::|:||::........:.|||.|:.:::.|..|...|.|:  |    |.|:.    :..|:|.|
  Fly   118 GISFLGNYNWDTLEPNMISAAQQLLNDAVNRGQLSSGYILY--GHRQVSATECPGTHIWNEIRGW 180

  Fly   318 PHYA 321
            .|::
  Fly   181 SHWS 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LD	NP_001137893.1	PGRP	169..306	CDD:128941	39/151 (26%)
PGRP-SC1a	NP_610407.1	PGRP	22..163	CDD:128941	40/165 (24%)