DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and zgc:110425

DIOPT Version :9

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001018582.1 Gene:zgc:110425 / 553782 ZFINID:ZDB-GENE-050522-103 Length:195 Species:Danio rerio


Alignment Length:213 Identity:83/213 - (38%)
Similarity:105/213 - (49%) Gaps:29/213 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AGTKAKKASATPSHPPTQQMGDA-------SIKNLKERGGSSLLAIKKYITA-TYKCDAQKLAPF 89
            |.|..|.|...|:..|.::.|.:       ::...|||.|.||.|:||.::| .|  |.:|....
Zfish     2 AETATKAAKKKPAAKPKKRTGPSVSELIVKAVSASKERSGVSLPALKKALSAGGY--DVEKNNSR 64

  Fly    90 IKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSS 154
            :|..:|:.|:.|.|.||||.||||||||:....:.|...|| |.....||..:||.|:||     
Zfish    65 VKIAIKALVLKGDLKQTKGIGASGSFKLNKKPAETKTKPAK-KAAPKAKKPAAKKPAAKK----- 123

  Fly   155 KKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIKSKPAATKAKVTAAKPKAVIAK 219
                 .||.|||||.|..|.||:.  ||..|...|..|     |:|..||..|...:..||..||
Zfish   124 -----PAAAKKPKAAKKPAAKKSP--KKPAKKATKSPK-----KAKKPATPKKAAKSPKKAKAAK 176

  Fly   220 ASKAKPAVSAKPKKTVKK 237
            ...|||. :||||||..|
Zfish   177 PKAAKPK-AAKPKKTAAK 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 Linker_histone 46..118 CDD:278939 31/79 (39%)
zgc:110425NP_001018582.1 Linker_histone 23..93 CDD:278939 29/71 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I11086
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4847
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11467
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X117
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.970

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