DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and h1-10

DIOPT Version :9

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001016699.1 Gene:h1-10 / 549453 XenbaseID:XB-GENE-5928644 Length:211 Species:Xenopus tropicalis


Alignment Length:250 Identity:70/250 - (28%)
Similarity:104/250 - (41%) Gaps:56/250 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PVAAPPATVEKKVGQKKASGSAGTKAKKASATPSHPPTQ----------QMGDASIKNLKERGGS 66
            |..||.|.:              |.|::..|:||..|.:          |:...:|:.|.||.||
 Frog     5 PETAPEAPL--------------TPAQQVRASPSKSPKKRKKNQPGRYSQLAVDTIRKLGERNGS 55

  Fly    67 SLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKS 131
            ||..|..........|.|....::|..:|:.:.|..|.||:|.||:|||:|:             
 Frog    56 SLAKIYSEARKVPWFDQQNGRTYLKYSIKALLHNKTLTQTRGVGANGSFRLN------------- 107

  Fly   132 KVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGI 196
              |...|.:|.:|..|         .|.....|.|:|.:. .||..|:..|....||..|:... 
 Frog   108 --LETLKGMQGRKKPS---------VAKRPVSKAPRAPRG-HTKSHAKGHKASPKKAGRARVAA- 159

  Fly   197 IKSKPAATKAKVTAAKPKAVIAKASKAKPAV-SAKPKKTVKKASVSATAKKPKAK 250
             ||...|.:|:|.|..||    ||.:|:.|. |.|..:|.:|.:.|...::|:|:
 Frog   160 -KSPKKAGRARVPAKSPK----KAGRARVAAKSPKKPRTPQKGTRSMKRRQPRAR 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 Linker_histone 46..118 CDD:278939 25/81 (31%)
h1-10NP_001016699.1 Linker_histone 38..107 CDD:366156 24/68 (35%)
valS <116..197 CDD:237855 28/96 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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