DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and BigH1

DIOPT Version :9

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_650383.2 Gene:BigH1 / 41780 FlyBaseID:FBgn0038252 Length:353 Species:Drosophila melanogaster


Alignment Length:256 Identity:75/256 - (29%)
Similarity:113/256 - (44%) Gaps:69/256 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SIKNLKERGGSSLLAIKKYIT---ATYKCDAQKLAPFIKKYLKSAVVNGKLIQT--------KGK 109
            :|..|..|.|||:.||..|:.   ..:| |.:|.|..:.:.||.|..||:::..        |.|
  Fly   109 AIGKLASRSGSSVQAIMTYLKDNGQEWK-DPKKTARLLHRALKLAEANGEVVMVKRSFKLTDKQK 172

  Fly   110 GASGSF-KLSASAKKEKDPKAK-SKVL-------SAEKKVQSKKVASKKIGVSSKKTAVGAADKK 165
            .:|.:. |:.|..:|||:.||| .|||       .|:.|::.||.:.:|   |||.|       :
  Fly   173 NSSKAVEKMKAKKQKEKEKKAKVEKVLKEKIQKKEAKAKMKEKKASKEK---SSKPT-------E 227

  Fly   166 PKAKKAVATKK----TAENKKTEKAKAK-------DAKKTGIIKS--KPAATKAKV--------- 208
            .|.|:||..||    |.:|....||.:.       :..:|.|.::  |||.||.|:         
  Fly   228 RKTKQAVKKKKPEDGTKDNPPASKAASSAAAQAMLETSQTAIPEAGKKPAKTKVKLQADSSEAGK 292

  Fly   209 ---------TAAKPKAVIAKASKAKPAVSAK----PKKTVKKASVSATAKKPKAKTTAAKK 256
                     |.|:|||...|....|..|:.|    |..::.:|..::|   |:..|.|.:|
  Fly   293 TKKSRKSIGTLAQPKAARPKVKAVKKLVAGKGASTPDLSIMEAQATST---PQGATKAKRK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 Linker_histone 46..118 CDD:278939 22/73 (30%)
BigH1NP_650383.2 H15 109..167 CDD:294056 18/58 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11467
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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