DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and MGC69473

DIOPT Version :9

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001001233.1 Gene:MGC69473 / 407914 XenbaseID:XB-GENE-982799 Length:234 Species:Xenopus tropicalis


Alignment Length:217 Identity:70/217 - (32%)
Similarity:95/217 - (43%) Gaps:36/217 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KVGQKKASGSAGTKAKKASATPSHPPTQQMGDASIKNLKERGGSSLLAIKKYITATYKCDAQKLA 87
            |.|...:|.|:|:..||...........|:...:|:.|.||.||||..|..........|.|...
 Frog    53 KGGASSSSSSSGSAKKKKKKKNQPGRYSQLVVDTIRKLGERNGSSLAKIYSEAKKVAWFDQQNGR 117

  Fly    88 PFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKIGV 152
            .::|..:|:.|.|..|:|.||.||:|||:|:         |.|.:.|..|||      |:.....
 Frog   118 TYLKYSIKALVQNDTLLQVKGVGANGSFRLN---------KKKLEGLPFEKK------AAPPAKP 167

  Fly   153 SSKKTAVGAADKKPKA-KKAVATKKTAENKKTEKAKAKDAKKTGIIKSKPAATKAKVTAAKPKAV 216
            .||:.|..|:....|: |||   |.|||.:|.:|:..|            |.:|:....||.|.|
 Frog   168 PSKRRAPAASSSPAKSHKKA---KPTAEKEKPQKSSVK------------APSKSHKKGAKGKKV 217

  Fly   217 IAKASKAKPAVSAKPKKTVKKA 238
               ...|||:|...||.  |||
 Frog   218 ---KKGAKPSVPKVPKS--KKA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 Linker_histone 46..118 CDD:278939 25/71 (35%)
MGC69473NP_001001233.1 Linker_histone 79..148 CDD:306920 25/68 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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