DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and h1m

DIOPT Version :10

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_898894.2 Gene:h1m / 327403 ZFINID:ZDB-GENE-030131-5614 Length:257 Species:Danio rerio


Alignment Length:261 Identity:82/261 - (31%)
Similarity:119/261 - (45%) Gaps:29/261 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AAPPATV----EKKVGQKKASGSAGTKAKKASATPS-HPPTQQMGDASIKNLKERGGSSLLAIKK 73
            |.|.||:    |.::.:.|.:....:.||.|:...| ||.|.:|...::|.|..|.|.|..||:.
Zfish     8 AEPTATITKGSENEITETKPAAPEDSNAKSAARKVSPHPSTMEMVKEALKELDSRKGVSAQAIRG 72

  Fly    74 YITATY-KCDAQKLAPFIKKYLKSAVVNGKLIQTKGK----GASGSFKLSASAKKEKDPKAKSKV 133
            ||...| ..|..:|...:::.|...:..|..::....    ||.|.|:::|.. |.|:.||:||.
Zfish    73 YIKEKYTTVDETRLKYMVRRALNKGMDTGVFVRPANSGSTTGAQGRFRIAAKT-KAKEAKAQSKE 136

  Fly   134 LSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAV---ATKKTAENKKTEKAKAKDAKKTG 195
            .:...:.::.|...:|   ::|....||..:||..||..   |..||:|...| .:|...|||. 
Zfish   137 NADPNEPKATKPKKEK---ATKAKGEGATKEKPTKKKETTDDAKPKTSEQNGT-ASKVAPAKKP- 196

  Fly   196 IIKSKPAATKAKVTAAKPKAVIAKASK---AKPAVSAKPKKTVKKA--SVSATAKKPKAKTTAAK 255
              |:|.||.:.   .||||...|||||   .:||.....||...:|  ..|..|...||....||
Zfish   197 --KAKNAAGEG---GAKPKPSKAKASKEGAEEPATKKGGKKNAARAEDGESGAAATEKAPGKRAK 256

  Fly   256 K 256
            |
Zfish   257 K 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 H15 43..130 CDD:238028 27/92 (29%)
h1mNP_898894.2 Linker_histone 45..119 CDD:459846 21/73 (29%)

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