DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and H1f3

DIOPT Version :10

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_663759.3 Gene:H1f3 / 14957 MGIID:107502 Length:221 Species:Mus musculus


Alignment Length:260 Identity:104/260 - (40%)
Similarity:127/260 - (48%) Gaps:49/260 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVGQKKASGSAGTKAKKASATPSHPPTQQMGDASIKNLKERGG 65
            ||::|.|..|:|.......|:||.  ||...:||  .:|||.    ||..::...::...|||.|
Mouse     1 MSETAPAAPAAPAPVEKTPVKKKA--KKTGAAAG--KRKASG----PPVSELITKAVAASKERSG 57

  Fly    66 SSLLAIKKYITAT-YKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.|. |  |.:|....||..|||.|..|.|:||||.||||||||:   ||....:|
Mouse    58 VSLAALKKALAAAGY--DVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLN---KKAASGEA 117

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKT 194
            |.|              :||.|.:..|...|||.|..||..|...||||  |||.|...|.|...
Mouse   118 KPK--------------AKKAGAAKAKKPAGAAKKPKKATGAATPKKTA--KKTPKKAKKPAAAA 166

  Fly   195 GIIKSKPAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKKASVSATAKKPKA---KTTAAKK 256
            |  ..|.:.:..||.|||||    ||:|: ||.:..||         |.|.||||   |.|.|||
Mouse   167 G--AKKVSKSPKKVKAAKPK----KAAKS-PAKAKAPK---------AKASKPKASKPKATKAKK 215

  Fly   257  256
            Mouse   216  215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 H15 43..130 CDD:238028 37/87 (43%)
H1f3NP_663759.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 18/48 (38%)
H15 35..115 CDD:238028 40/88 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..221 67/159 (42%)

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