DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33834 and LOC101730918

DIOPT Version :9

Sequence 1:NP_001027334.1 Gene:His1:CG33834 / 3771911 FlyBaseID:FBgn0053834 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004919170.1 Gene:LOC101730918 / 101730918 -ID:- Length:229 Species:Xenopus tropicalis


Alignment Length:242 Identity:99/242 - (40%)
Similarity:125/242 - (51%) Gaps:32/242 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVGQKKASGSAGTKAKKASATPSHPPTQQMGDASIKNLKERGG 65
            |:::|..|:.:|..|.||..:||..:|     .|.||||    |:.|...::...::...|||.|
 Frog     1 MTETAAETAPAPPPAEPAAAKKKQPKK-----GGAKAKK----PAGPSAAELIVKAVSASKERSG 56

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:....:.|:..|
 Frog    57 VSLAALKKALAAGGY--DVERNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKPLESKEKAA 119

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKK-TAVGAADKKPK-----AKKAVATK--KTAENKKTEKA 186
            |.|  .|..||:....|:||...|.|| ..|.||.|.||     ||.|.:.|  |.|:.||..|:
 Frog   120 KKK--PAAPKVKKPAAAAKKAPKSPKKPKKVSAAAKSPKKVKKPAKAAKSPKKPKAAKPKKVAKS 182

  Fly   187 KAKDAKKTGIIKS------KPAATK--AKVTAAKPKAVIAKASKAKP 225
            .||.|.|....||      ||.|||  ||..||||||  |||.||.|
 Frog   183 PAKKAAKPKAAKSPAKKPTKPKATKSPAKAKAAKPKA--AKAKKAAP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33834NP_001027334.1 Linker_histone 46..118 CDD:278939 29/72 (40%)
LOC101730918XP_004919170.1 Linker_histone 41..108 CDD:366156 28/68 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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