DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33828 and h1-8

DIOPT Version :10

Sequence 1:NP_001027324.1 Gene:His1:CG33828 / 3771910 FlyBaseID:FBgn0053828 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001016391.2 Gene:h1-8 / 549145 XenbaseID:XB-GENE-977795 Length:252 Species:Xenopus tropicalis


Alignment Length:257 Identity:91/257 - (35%)
Similarity:124/257 - (48%) Gaps:31/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VAAPPATVEKKVVQKKASGSAGTKAK--KASATPSHPPTQQMVDASIKNLKERGGSSLLAIKKYI 75
            ||||....||..    |:||:..|.|  |...|.|||||..||..::|...||.|:|:.||:..|
 Frog     7 VAAPEEGKEKAA----ATGSSKVKRKSIKLVKTQSHPPTLAMVVEALKKNTERKGTSVQAIRTRI 67

  Fly    76 TATY-KCDAQKLAPFIKKYLKSAVVNGKLIQ---TKGKGASGSFKLSASAKKEKDPK------AK 130
            .|.: ..|..:|...::..|...:..|.||:   :...||:|.|||   ||..|.||      |.
 Frog    68 LAAHPTVDPLRLKFLLRTALNKGLEKGILIRPLNSSATGATGRFKL---AKPVKAPKAGKEENAA 129

  Fly   131 SKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTG 195
            |:.:....:|:.:|.|.||    .||   ...||:||.:|..|..|.|:.:..||.||..:||..
 Frog   130 SENVDPNAEVKPQKKAPKK----EKK---AKTDKEPKGEKPKAGAKKAKEESDEKPKAAKSKKDT 187

  Fly   196 IIKSKPAATKAKVTAAKPKAVVAKASKAKPAVSAK-PKKTVKKASVSATAKKPKAKTTAAKK 256
            ..|..   .|||..|.|||| ..:|:||:....|| |.|..:..:.:|.|:|..|:..|..|
 Frog   188 EAKED---EKAKAPAKKPKA-KTEAAKAEGETKAKEPAKAKEAKAEAAKAQKDSAEEGAPVK 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33828NP_001027324.1 H15 43..130 CDD:238028 34/96 (35%)
h1-8NP_001016391.2 Linker_histone 38..111 CDD:459846 24/72 (33%)

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