DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eys and egflam

DIOPT Version :9

Sequence 1:NP_001027571.3 Gene:eys / 3771890 FlyBaseID:FBgn0031414 Length:2176 Species:Drosophila melanogaster
Sequence 2:XP_009299464.1 Gene:egflam / 799405 -ID:- Length:1056 Species:Danio rerio


Alignment Length:1318 Identity:284/1318 - (21%)
Similarity:448/1318 - (33%) Gaps:410/1318 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   631 EVTTVRPTA---APSITISVDITSSGSSSSSSESVEVFTTPAPVFVQ-RVTT------------- 678
            |:...|||:   ...:.:|:::.::|.....: |.:|......|..| ||:.             
Zfish    73 EMRNNRPTSNAVVLEVPLSLEMLTTGQFDGQA-SFDVVIGNLKVATQYRVSVGAYGWAGEGRPSM 136

  Fly   679 ---IETSISIDYVTPTPLPETTTPRVVPVPRPTFAPEPPLDVVETTASTHHLWTEVPTTAAPFFT 740
               |.|......:.|.|   .|.|.||.|           ...|...|..|..::.......|..
Zfish   137 PRDISTGSHEKCMPPAP---PTQPNVVAV-----------SDTELAMSWQHGESDGSAPVLYFLV 187

  Fly   741 EYPAEVLITTHRTSAGRFTTVQPPAGVTTT---SPTEDSSVELP--TPHTP-QIVVTILDSNEVI 799
            .|                  ::|......|   .|.|.:|:.|.  .|.|. |.|:..::::.:.
Zfish   188 AY------------------IRPEMDTEWTYIREPVESNSMVLKGLIPETEYQFVIRAVNAHGIS 234

  Fly   800 P-----SLITTTGSPTTHHHHHHHPHHEAEGTTLQPLEEDEHHHHHHHDEFTTPQPVEITTGHPL 859
            |     :.:.|.||..|....:......::......|:.|:..:....:|...|...:  :|...
Zfish   235 PPSAINNPVRTLGSVDTGSGDYDVYISNSDNKDEDKLDIDDSDYDFFIEEMKFPSSKK--SGRRS 297

  Fly   860 QTEDLIGVQEPAVVTTESPFAPAETTVV-----PVVVPATIAPLGTAAPPATPAPVPPATTTPPP 919
            |....||             .|....|:     ||....:..|        |.|.:...|||   
Zfish   298 QLRSRIG-------------TPGNGNVIYRMRTPVSPNISFTP--------TTASIWTTTTT--- 338

  Fly   920 SPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQTLPPPTSAINVYTTPDGPPTASQ 984
              .:..|.|.|...|..|:.  ....|||.:|.:.||     ..|.......||           
Zfish   339 --TTTVTMTTTSRTTATPIV--RTATPPPAVPSSSPS-----MTPWKGERARVY----------- 383

  Fly   985 TKPSVTESSEEVEGTNTVSTGGRGSGGVPEEKAGDVDCIKLGCYNGGTCVTTSE--GSRCVCRFD 1047
                                              ||.|.:..|.....|:...:  ||||.|...
Zfish   384 ----------------------------------DVPCEETVCPADSFCINDYDTGGSRCHCNLG 414

  Fly  1048 RQGPLCELPIIIRNAAFSGDSYVSHRIYKDIGGHESLDAVLPMHIQLKVRTRATNGLIMLAAAQG 1112
            |||..|...:.|....|.|.|:::....|:  .::|      ..|.|:.:..|.:||::......
Zfish   415 RQGDFCSEGLTINFPKFYGYSHMTFEPLKN--SYQS------FQISLEFKAEAEDGLLLYCGENE 471

  Fly  1113 TKGGHYMALFLQKGLMQFQFSCGL-QTMLLSELETPVNTGHEITIRAELDFSRNYTHCNASL-LV 1175
            ...|.:.:|.|.:|.:.::|:||. ...::|:....:...|.:||..:        ..|..| |.
Zfish   472 HGRGDFTSLALIRGKLHYRFNCGTGAAQIISDSSIVIGQWHTVTIFRD--------GMNGWLRLD 528

  Fly  1176 NDTLAMSGDQPTWLKLLPPRLHTPEAILNTWLHLGGAPQA-----PIGLIIELPPAQSGSGFTGC 1235
            |||...|..|..:.|:          ...|.|.|||||..     .:|         :..||.||
Zfish   529 NDTPVSSRSQGQYTKI----------TFRTALFLGGAPNGYWLVRAVG---------TNRGFQGC 574

  Fly  1236 LHTLRINGQAREI----FGDALDGFGITECGSLACLSSPCRNGAACIKIETNDLDENGEKAEKWK 1296
            :.:|.:|.:|.:|    .|:||.|..|.||.:                                 
Zfish   575 MQSLTVNSKAIDIRPWPKGNALSGADIGECSN--------------------------------- 606

  Fly  1297 CKCPTGYMGPTCEISVCEDNPCQYGGTCVQFPGSGYLCLCPLGKHGHYCEHNLEVALPSFSGSVN 1361
                          ||||...|..||.|......|::||||||..|..||.:..::||.|:.|: 
Zfish   607 --------------SVCEKVTCANGGICFANRADGFICLCPLGYKGFLCEESFLLSLPQFNQSM- 656

  Fly  1362 GLSSFVAYTVPIPLEYSLELSFKILPQTMSQIS----LLAFFGQSGYHDEKS--DHLAVSFIQGY 1420
                |...:.|.|......|||.....|....|    ||       |.|:.:  |.|::|.:.||
Zfish   657 ----FSYASAPWPQSSHNYLSFMEFEVTFQPTSPDGTLL-------YTDDATSRDFLSISLVAGY 710

  Fly  1421 IMLTWNLGAGPRRIFTQKPIDFRLDAPRVPYEIKVGRIGRQAWLSVDGKFNITGRSPGSGSRMDV 1485
            :...::.|:|...|.:::.|     |..|.:|::|.|..:...|.||.:..:.|.:.|:.:::..
Zfish   711 VEFRFDCGSGATVIRSEEAI-----AMNVWHELRVSRTAKNGILQVDNQRPVEGMAEGAFTQIKC 770

  Fly  1486 LPILYLGGHEIANFNTLPHDLPLHSGFQGCIYDVQLKAGQVTVPLQETRGVRGRGVGQCGTRECH 1550
            ...||:||  :.|::.......:...:.|.:..:.|          ..||:.             
Zfish   771 SSPLYIGG--VPNYDITKPSAGILRPYSGSVQKITL----------NDRGIE------------- 810

  Fly  1551 RHACQHDGACLQHGATFTCICQEGWYGPLCAQPTNPCDSFNNKCYEDATCVPLVNGYECDCPVGR 1615
                      |..|..|         |.......:||  .:|.|....||....:.|:|||.:|.
Zfish   811 ----------LNPGQAF---------GVNVLNAAHPC--VDNPCANGGTCRAKWDEYDCDCALGY 854

  Fly  1616 TGKNCEE---------VIRSLSDVSLTGRRSYLAVRWPYLYDGGDKLGAKRSQMVSYRNFTKKLM 1671
            .||:|::         |..|:.....|| ||||.      ||..|.|  ||              
Zfish   855 DGKHCQKECGNYCLNTVTESIEIPQFTG-RSYLT------YDNRDIL--KR-------------- 896

  Fly  1672 PPKPITTPSSHFVMKLLNEVEKQRSFSPVPLMGSKSFEEHHRVQFFFIEFQLRPLSERGLLLYFG 1736
                                          :.||::        ..|:.|  :..|:.||||:.|
Zfish   897 ------------------------------ISGSRT--------NLFMRF--KSTSKDGLLLWRG 921

  Fly  1737 --TLNNNQDKKIGFVSLSLQGGVVEFRISGPSNHVTVVRSVRMLAIGEWHKIKMAQRGRWLTLWV 1799
              .:..|.|    ::||.||.|.:.|..:..|...|||.: ...:.|:||::|..:.|:...|.|
Zfish   922 ESPMRANSD----YLSLGLQDGSLIFSYNLGSGAATVVIN-GTFSDGKWHRVKAVRDGQSGKLTV 981

  Fly  1800 EG-SASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVVSGTRIVLNE- 1862
            :. .|.:..:|.....:..:..|||||:|::: |..|         |..:||||...:...|.. 
Zfish   982 DDYGAQTGRSPGKMRQLNINGDLYIGGMKEIA-LHTN---------RQYMRGLVGCISHFTLATD 1036

  Fly  1863 ------TNIVESRNIRDC 1874
                  .:.|:.:||..|
Zfish  1037 YHLSLVDDAVDGKNINTC 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eysNP_001027571.3 EGF_CA 184..218 CDD:238011
EGF_CA 220..256 CDD:238011
EGF_CA <270..298 CDD:238011
EGF_CA 301..336 CDD:238011
EGF 342..371 CDD:278437
EGF_CA 378..413 CDD:238011
Laminin_G_2 1096..1244 CDD:280389 37/154 (24%)
EGF_CA 1314..1346 CDD:238011 13/31 (42%)
LamG 1355..1521 CDD:238058 39/171 (23%)
EGF 1549..1578 CDD:278437 3/28 (11%)
EGF_CA 1585..1621 CDD:238011 13/35 (37%)
Laminin_G_2 1723..1856 CDD:280389 40/135 (30%)
LamG 1956..2144 CDD:238058
egflamXP_009299464.1 FN3 35..142 CDD:238020 13/69 (19%)
FN3 151..237 CDD:238020 23/117 (20%)
LamG 431..581 CDD:238058 43/184 (23%)
EGF_CA 600..642 CDD:238011 19/88 (22%)
LamG 658..805 CDD:238058 37/170 (22%)
EGF 828..858 CDD:278437 11/31 (35%)
Laminin_G_2 908..1033 CDD:280389 41/141 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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