DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eys and Egflam

DIOPT Version :9

Sequence 1:NP_001027571.3 Gene:eys / 3771890 FlyBaseID:FBgn0031414 Length:2176 Species:Drosophila melanogaster
Sequence 2:XP_006232075.1 Gene:Egflam / 365691 RGDID:1306592 Length:1013 Species:Rattus norvegicus


Alignment Length:1196 Identity:266/1196 - (22%)
Similarity:429/1196 - (35%) Gaps:354/1196 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   740 TEYPAEVLITTHRTSAGRFTTVQPPAGVTTTSPTEDSSVELPTPHTPQIVVTILDSNEVIPSLIT 804
            |||...:...: :|..||.:.   |..|||.|  :||.:....||.|.::|       |..|.:.
  Rat   108 TEYRVSIAAYS-QTGKGRLSF---PRHVTTLS--QDSCLPPEAPHQPHVLV-------VSDSEVA 159

  Fly   805 TTGSPTTHHHHHHHPHHEAEGTTLQPLEEDEHHHHHHHDEFTTPQPVEITT--GHPLQTEDLI-- 865
            .:..|           .|.||:.  |::.       :..||..|...:..|  ...||.:.::  
  Rat   160 LSWRP-----------GENEGSA--PIQS-------YSVEFIRPDFDKSWTIIQERLQMDSMVIK 204

  Fly   866 GVQEPAVVTTESPFA--------------PAETTVVPVVVPATIAPLGTAAPPATPAPVPPATTT 916
            |: :|   .|...||              |:.|.       .|:.|....:....|..:   |.|
  Rat   205 GL-DP---DTNYQFAVRAMNAYGFSLRSQPSNTI-------RTLGPGEAGSGRYGPGYI---TDT 255

  Fly   917 PPPSPPSLATETPTLPPTLPPVTLPPVTQ--PPPTIPPTPPSTQSAQTLPPPTSAINVYTTPDGP 979
            ........:.:...|..:...|...|.|:  ...:...:..:::....|..||||....||...|
  Rat   256 GVSEDDDASEDELDLDVSFEEVKPLPATKVGNKKSKKTSVSNSEMDSRLAQPTSASLPETTVAVP 320

  Fly   980 PTASQTKPSVTESSEEVEGTNTVSTGGRGSGGVPEEKAGDVDCIKLGCYNGGTCVTTSE--GSRC 1042
            ||.:|.|           |.|:|:...|         ..|:.|.:..|.....||....  ||||
  Rat   321 PTPAQRK-----------GKNSVAVMSR---------LFDMSCDETLCSADSFCVNDYAWGGSRC 365

  Fly  1043 VCRFDRQGPLCELPIIIRNAAFSGDSYVSHRIYKDIGGHESLDAVLPMHIQLKVRTRATNGLIML 1107
            .|...:.|..|...|.|:...|.|.|||:....|:     |..|   ..|.|:.|..|.:||::.
  Rat   366 HCNLGKGGEACSEDIFIQYPQFFGHSYVTFEPLKN-----SYQA---FQITLEFRAEAEDGLLLY 422

  Fly  1108 AAAQGTKGGHYMALFLQKGLMQFQFSCGL-QTMLLSELETPVNTGHEITIRAELDFSRNYTHCNA 1171
            ........|.:|:|.|.:..:.|:|:||. ..:::||.:..:...|.:|:..:        ..|.
  Rat   423 CGESEHGRGDFMSLALIRRSLHFRFNCGTGMAIIISETKIKLGAWHSVTLYRD--------GLNG 479

  Fly  1172 SLLVNDTLAMSG-DQPTWLKLLPPRLHTPEAILNTWLHLGGAPQAPIGLIIELPPAQSGSGFTGC 1235
            .|.:|:...::| .|..:.|:   ...||       |:|||||.| ..|:   ....:..||.||
  Rat   480 LLQLNNGTPVTGQSQGQYSKI---TFRTP-------LYLGGAPSA-YWLV---RATGTNRGFQGC 530

  Fly  1236 LHTLRINGQAREI----FGDALDGFGITECGSLACLSSPCRNGAACIKIETNDLDENGEKAEKWK 1296
            :.:|.:||:..::    .|.||:|..:.||.|                                 
  Rat   531 VQSLAVNGKKIDMRPWPLGKALNGADVGECSS--------------------------------- 562

  Fly  1297 CKCPTGYMGPTCEISVCEDNPCQYGGTCVQFPGSGYLCLCPLGKHGHYCEHNLEVALPSFSGSVN 1361
                          .:|::..|..||||.......|:||||||..|.:||....:.:|.|..|  
  Rat   563 --------------GICDEASCINGGTCAAIKADSYICLCPLGFRGRHCEDAFTLTIPQFRES-- 611

  Fly  1362 GLSSFVAYTVPIPLEYSLELSFKILPQTMSQISLLAFFGQSG-------YHDEKSDHLAVSFIQG 1419
             |.|:.|  .|.|||....|||     |..:|:   |...||       |.....|.|::....|
  Rat   612 -LRSYAA--TPWPLEPQHYLSF-----TEFEIT---FRPDSGDGVLLYSYDTSSKDFLSIIMAAG 665

  Fly  1420 YIMLTWNLGAGPRRIFTQKPIDFRLDAPRVPYEIKVGRIGRQAWLSVDGKFNITGRSPGSGSRMD 1484
            ::...::.|:|...:.::..:..     ...::::|.|..:...|.||.:..:.|.:.|..:::.
  Rat   666 HVEFRFDCGSGTGVLRSEDTLTL-----GQWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIK 725

  Fly  1485 VLPILYLGGHEIANFNTLPHDLPLHSG----FQGCIYDVQLKAGQVTVPLQETRGVRGRGVGQCG 1545
            ....:::||  :.|::    |:..:||    |.|.|..:.|....:.|....|.||......   
  Rat   726 CNTDIFIGG--VPNYD----DVKKNSGILHPFSGSIQKIILNDRTIHVRHDFTSGVNVENAA--- 781

  Fly  1546 TRECHRHACQHDGACLQHGATFTCICQEGWYGPLCAQPTNPCDSFNNKCYEDATCVPLVNGYECD 1610
                  |.|.  ||...||                                 .:|.|...|||||
  Rat   782 ------HPCV--GAPCAHG---------------------------------GSCRPRKEGYECD 805

  Fly  1611 CPVGRTGKNCEE---------VIRSLSDVSLTGRRSYLAVRWPYLYDGGDKLGAKRSQMVSYRNF 1666
            ||:|..|.||::         :..::......| ||||.      ||..:               
  Rat   806 CPLGFEGLNCQKECGNYCLNTITEAIEIPQFIG-RSYLT------YDNPN--------------- 848

  Fly  1667 TKKLMPPKPITTPSSHFVMKLLNEVEKQRSFSPVPLMGSKSFEEHHRVQFFFIEFQLRPLSERGL 1731
                                :|..|...||.:                   |:.|  :..::.||
  Rat   849 --------------------ILKRVSGSRSNA-------------------FMRF--KTTAKDGL 872

  Fly  1732 LLYFG--TLNNNQDKKIGFVSLSLQGGVVEFRISGPSNHVTVVRSVRM---LAIGEWHKIKMAQR 1791
            ||:.|  .:..|.|    |:||.|:.|.:.|..:..|.    |.|:.:   .:.|.||::|..:.
  Rat   873 LLWRGDSPMRPNSD----FISLGLRDGALVFSYNLGSG----VASIMVNGSFSDGRWHRVKAVRD 929

  Fly  1792 GRWLTLWVEG-SASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVVSG 1855
            |:...:.|:. .|.:..:|.....:..:..||:||:|::: |..|         |..:||||...
  Rat   930 GQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIA-LHTN---------RQYMRGLVGCI 984

  Fly  1856 TRIVLNE-------TNIVESRNIRDC 1874
            :...|:.       .:.|:.:||..|
  Rat   985 SHFTLSTDYHISLVEDAVDGKNINTC 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eysNP_001027571.3 EGF_CA 184..218 CDD:238011
EGF_CA 220..256 CDD:238011
EGF_CA <270..298 CDD:238011
EGF_CA 301..336 CDD:238011
EGF 342..371 CDD:278437
EGF_CA 378..413 CDD:238011
Laminin_G_2 1096..1244 CDD:280389 38/149 (26%)
EGF_CA 1314..1346 CDD:238011 13/31 (42%)
LamG 1355..1521 CDD:238058 39/176 (22%)
EGF 1549..1578 CDD:278437 6/28 (21%)
EGF_CA 1585..1621 CDD:238011 12/35 (34%)
Laminin_G_2 1723..1856 CDD:280389 36/138 (26%)
LamG 1956..2144 CDD:238058
EgflamXP_006232075.1 FN3 36..133 CDD:238020 8/28 (29%)
FN3 142..236 CDD:238020 24/131 (18%)
LamG 387..537 CDD:238058 47/179 (26%)
EGF_CA 556..598 CDD:238011 17/88 (19%)
Laminin_G_2 637..763 CDD:280389 26/136 (19%)
EGF_CA 786..816 CDD:238011 16/62 (26%)
Laminin_G_2 864..989 CDD:280389 37/144 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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