DRSC/TRiP Functional Genomics Resources

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Protein Alignment eys and jag1

DIOPT Version :10

Sequence 1:NP_001027571.3 Gene:eys / 3771890 FlyBaseID:FBgn0031414 Length:2176 Species:Drosophila melanogaster
Sequence 2:XP_002931784.1 Gene:jag1 / 100486874 XenbaseID:XB-GENE-485662 Length:1218 Species:Xenopus tropicalis


Alignment Length:457 Identity:133/457 - (29%)
Similarity:202/457 - (44%) Gaps:67/457 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 LLPALILAILVGSSQAGFACL-SNPC-VFGVCIDGLNSSYSCYCIDGYTGIQCQTNWDECWSSPC 191
            ::.:..:|:...|:..|...: ||.| ..|.|.......::|.|..|:||..|..|.::|.|:||
 Frog   574 VIDSCTVAVASNSTPEGVRYISSNVCGPHGKCRSQSGGKFTCECNKGFTGTYCHENINDCESNPC 638

  Fly   192 QNGGTCVDGVAYYNCTCPEGFSGSNCEENVDECMSNPCQNGGLCRDRTNGYICTCQPGYLGSHCE 256
            :|||||:|||..|.|.|.:|:.|..||.|:::|..|||.|||.|||..|.:.|.|:.|:.|..|.
 Frog   639 KNGGTCIDGVNSYKCICSDGWEGIYCETNINDCSKNPCYNGGTCRDLVNDFYCECKNGWKGKTCH 703

  Fly   257 LDVAVCETGTGARCQHGGECIEGPGLEFTCDCPAGWHGRICQEEIN-ECASSPCQNGGVCVDKLA 320
            ...:.|:..|   |.:||.|.: .|..|.|.|||||.|..|....| .|..:||.|||.||.:..
 Frog   704 SRDSQCDEAT---CNNGGTCYD-EGDTFKCICPAGWEGATCNIARNSSCLPNPCFNGGTCVVRGD 764

  Fly   321 AYACACPMGYTGINCEEEILICADNPCQNNALCLMEEGVPTCYCVPDYHGEKCEFQYDECQLGPR 385
            ::.|.|..|:.|..|.:....|:.:||.|:..|:..:....|.|.|.:.|..|....:|||..| 
 Frog   765 SFTCVCKEGWEGPTCSQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSP- 828

  Fly   386 CMNGGVCIDGVDTFSCSCPPLLTGMLCE------CLMVG-------EESLDCN--------YTAP 429
            |..|..|||.::.:.|:|||..:|..|:      |:..|       :...|||        .|..
 Frog   829 CAFGATCIDEINGYRCTCPPGRSGPRCQEVTGRPCITNGHMMPDGAKWDDDCNSCQCLNGKVTCS 893

  Fly   430 ATQSPPRRTTTTSTMAPPT-------------VRPVT----------PPETTVSPSRAS-EEVEI 470
            .....|:|.....:...|.             |.|.|          ||..|...:.|| ::...
 Frog   894 KVWCGPQRCDIHGSSECPAGQTCVPIRDNHCFVPPCTGVGECWPTNQPPVKTKCNANASYQDASC 958

  Fly   471 IVVTTSAPAEVVTSVLSPSSSSSSSEEGVSVEIKTPTVAPPESGSHSISVEQTTAVPAQPEPESE 535
            ..:|.:...|    ::||..::    |.:..|::...:.      .::|.|.:..:..:..|.:.
 Frog   959 ANITFTFNKE----MMSPGLTT----ESICNELRNLNIL------KNVSAEYSIYITCELSPSAN 1009

  Fly   536 QE 537
            .|
 Frog  1010 NE 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eysNP_001027571.3 EGF_CA 184..218 CDD:238011 17/33 (52%)
EGF_CA 220..256 CDD:238011 16/35 (46%)
EGF_CA <270..298 CDD:238011 13/27 (48%)
EGF_CA 301..336 CDD:238011 13/35 (37%)
EGF 342..371 CDD:394967 8/28 (29%)
EGF_CA 378..413 CDD:238011 14/34 (41%)
Laminin_G_2 1096..1244 CDD:460494
EGF_CA 1314..1346 CDD:238011
LamG 1355..1521 CDD:238058
EGF 1549..1578 CDD:394967
EGF_CA 1585..1621 CDD:238011
Laminin_G_2 1723..1856 CDD:460494
LamG 1956..2144 CDD:238058
jag1XP_002931784.1 MNNL 32..185 CDD:462222
DSL 167..229 CDD:128366
EGF_CA 296..334 CDD:238011
EGF 340..370 CDD:394967
EGF_CA 374..410 CDD:238011
EGF_CA 412..447 CDD:238011
EGF_CA 450..485 CDD:238011
EGF_CA 487..523 CDD:238011
EGF_CA 525..560 CDD:238011
EGF_CA 629..665 CDD:238011 18/35 (51%)
EGF_CA 667..702 CDD:238011 16/34 (47%)
EGF 709..739 CDD:394967 15/33 (45%)
EGF 748..778 CDD:394967 12/29 (41%)
EGF_CA 782..817 CDD:238011 9/34 (26%)
EGF_CA 820..856 CDD:238011 14/36 (39%)
VWC_out 863..929 CDD:214565 10/65 (15%)
Blue background indicates that the domain is not in the aligned region.

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