DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eys and egflam

DIOPT Version :9

Sequence 1:NP_001027571.3 Gene:eys / 3771890 FlyBaseID:FBgn0031414 Length:2176 Species:Drosophila melanogaster
Sequence 2:XP_002938236.3 Gene:egflam / 100485123 XenbaseID:XB-GENE-968342 Length:1035 Species:Xenopus tropicalis


Alignment Length:1221 Identity:253/1221 - (20%)
Similarity:442/1221 - (36%) Gaps:379/1221 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   745 EVLI------TTHRTSAGRFTTV---QP--PAGVTTTSPTEDSSVELPTPHTPQIVVTILDSNEV 798
            ||::      |.||.|.|.::..   :|  |..::|.  .::|.:...:|..||:||  :...||
 Frog   105 EVILVDLKPGTLHRVSVGAYSWAGKGRPSMPRDISTL--PQESCMAPGSPSQPQVVV--VSDTEV 165

  Fly   799 IPS--LITTTGSPTTHHHHHHHPHHEAEGTTLQPLEED--------------------------- 834
            ..|  ..|:.|||...::...:...|.:|..: |:.:.                           
 Frog   166 AVSWQQNTSEGSPPVQYYSMEYIRPELDGIWI-PIRDQIQINSMVLKGLTPNTKYQFAVKAVNSF 229

  Fly   835 -EHHHHHHHDEFTTPQPVEITTG--------HPLQTEDLIGVQEPAVVTTES------------P 878
             |....|..:...|....|:.:|        .|...:|       ...|.:|            |
 Frog   230 GESLLSHESEIIRTFSTEELGSGSYGEGYVTDPKSDDD-------GYTTDDSDDDIYIDELKPLP 287

  Fly   879 FAPAETTVVPVVVPATIAPLGTAAPPATPAPVPPATTT---PPPSPPSLATETPTLPPTLPPVTL 940
            ...|.:|.|.|                 ...|.|.|.|   |..|..:::|.|.|:.        
 Frog   288 SGKAGSTKVLV-----------------DTKVTPGTYTKIIPLASKSTVSTVTSTIS-------- 327

  Fly   941 PPVTQPPPTIPPTPPSTQSAQTLPPPTSAINVYTTPDGPPTASQTKPSVTESSEEVEGTNTVSTG 1005
               |:.|.|...|..||.::.|                 ..|..||..:.:.             
 Frog   328 ---TKAPVTTSATTTSTMASTT-----------------TAAKATKAKMAKD------------- 359

  Fly  1006 GRGSGGVPEEKAGDVDCIKLGCYNGGTCVTTSE--GSRCVCRFDRQGPLCELPIIIRNAAFSGDS 1068
             ||:|..|  :..|:.|.:..|.....|:...:  ||:|.|...:.|..||..|.::...|.|.|
 Frog   360 -RGTGFPP--RLFDLTCEETFCPADSFCLNDYDRGGSQCHCNLGKAGGTCENDINVQFPQFYGHS 421

  Fly  1069 YVSHRIYKDIGGHESLDAVLPMHIQLKVRTRATNGLIMLAAAQGTKGGHYMALFLQKGLMQFQFS 1133
            |::....|        ::.....|.|:.|.::.:||::.........|.:|::.:.:..:||:|:
 Frog   422 YMTFEPLK--------NSYQTFQITLEFRAQSDDGLLLYCGENEYGRGDFMSVAIIRRSIQFRFN 478

  Fly  1134 CGLQTMLL-SELETPVNTGHEITIRAELDFSRNYTHCNASLLVNDTLAMSG-DQPTWLKLLPPRL 1196
            ||..|.:: |:.:..:.:.|.:.:..|        ..|..|.::::..:|. .|..:.|:   ..
 Frog   479 CGTGTAIITSDRKIKLGSWHVVRVYRE--------GTNGWLQLDNSSPISAKSQGQYSKI---TF 532

  Fly  1197 HTPEAILNTWLHLGGAPQAPIGLIIELPPAQSGSGFTGCLHTLRINGQAREI----FGDALDGFG 1257
            .||       .::||||.  :..:::  .|.:..||.||:.:|.:||::.::    .|.||.|..
 Frog   533 RTP-------FYIGGAPS--VYWLVK--SAGTNRGFKGCVQSLSLNGRSVDMRQWPLGKALSGAD 586

  Fly  1258 ITECGSLACLSSPCRNGAACIKIETNDLDENGEKAEKWKCKCPTGYMGPTCEISVCEDNPCQYGG 1322
            :.:                                               |.|.:|::.||..||
 Frog   587 VGD-----------------------------------------------CSIGICDEAPCLNGG 604

  Fly  1323 TCVQFPGSGYLCLCPLGKHGHYCEHNLEVALPSFSGSVNGLSSFVAYTVPIPLEYSLELSFKILP 1387
            ||.......||||||.|..|.:||....:|:|.|:.|....:|     ...|||....|||....
 Frog   605 TCRAKTADSYLCLCPAGFRGRHCEEAFTLAIPQFNESARSFAS-----ARWPLEPHHYLSFMEFD 664

  Fly  1388 QT----MSQISLLAFFGQSGYHDEKSDHLAVSFIQGYIMLTWNLGAGPRRIFTQKPIDFRLDAPR 1448
            .|    |...::|     ..|..:..|.::::.:.||::..::.|:|...|.|:||:     ...
 Frog   665 MTFRPDMEDGTIL-----YSYDTDSKDFISLTMVNGYVVFRFDCGSGTAVIRTEKPV-----TVG 719

  Fly  1449 VPYEIKVGRIGRQAWLSVDGKFNITGRSPGSGSRMDVLPILYLGGHEIANFNTLPHDLPLHSGFQ 1513
            ..:|::..|..|...|.||.:..:.|.|.|..:::.....|::||  :.:::|:..:..:...|.
 Frog   720 QWHELRFSRTARNGILQVDNQKQVYGISEGGFTQIKCNTDLFIGG--VPDYDTVKKNSGVLKPFT 782

  Fly  1514 GCIYDVQLKAGQVTVPLQETRGVRGRGVGQCGTRECHRHACQHDGACLQHGATFTCICQEGWYGP 1578
            |.|..:.|....:::       ::|..                .|..|::.              
 Frog   783 GSIQKLVLNDRIISL-------IQGLS----------------SGVNLENA-------------- 810

  Fly  1579 LCAQPTNPCDSFNNKCYEDATCVPLVNGYECDCPVGRTGKNCEEVIRSLSDVSLTGRRSYLAVRW 1643
                 .:||  .|..|....:|.|..:.||||||:|..||||::||....::.....||||    
 Frog   811 -----NHPC--ANIPCANGGSCRPQHDSYECDCPLGFDGKNCQKVITEAIEIPQFIGRSYL---- 864

  Fly  1644 PYLYDGGDKLGAKRSQMVSYRNFTKKLMPPKPITTPSSHFVMKLLNEVEKQRSFSPVPLMGSKSF 1708
              :||..|.|                    |.::...|:..|:....|:.               
 Frog   865 --IYDNRDIL--------------------KRVSGSRSNLFMRFKTTVKD--------------- 892

  Fly  1709 EEHHRVQFFFIEFQLRPLSERGLLLYFG--TLNNNQDKKIGFVSLSLQGGVVEFRISGPSNHVTV 1771
                                 |||::.|  .:..|.|    |:||.:|.|.:.|..:..|...::
 Frog   893 ---------------------GLLMWRGDSPIKANTD----FISLGIQQGNIVFSYNLGSGMASI 932

  Fly  1772 VRSVRMLAIGEWHKIKMAQRGRWLTLWVEG-SASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHN 1835
            |.: .....|.||::|..:.|:...:.|:. .|.:..:|.....:..:..||:||:|::: |..|
 Frog   933 VVN-GSFNDGRWHRVKAVRDGQTGKVTVDDYGAITGKSPGLMRQLNINGALYVGGMKEIA-LHTN 995

  Fly  1836 AISGFPIPFRGCVRGLVVSGTRIVLN---------ETNIVESRNIRDCDGT 1877
                     |..:|||:...:...|:         :.|  :.:||..| ||
 Frog   996 ---------RQYLRGLIGCISHFTLSTDFHISLVADAN--DGKNINTC-GT 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eysNP_001027571.3 EGF_CA 184..218 CDD:238011
EGF_CA 220..256 CDD:238011
EGF_CA <270..298 CDD:238011
EGF_CA 301..336 CDD:238011
EGF 342..371 CDD:278437
EGF_CA 378..413 CDD:238011
Laminin_G_2 1096..1244 CDD:280389 32/149 (21%)
EGF_CA 1314..1346 CDD:238011 14/31 (45%)
LamG 1355..1521 CDD:238058 38/169 (22%)
EGF 1549..1578 CDD:278437 2/28 (7%)
EGF_CA 1585..1621 CDD:238011 16/35 (46%)
Laminin_G_2 1723..1856 CDD:280389 33/135 (24%)
LamG 1956..2144 CDD:238058
egflamXP_002938236.3 FN3 34..140 CDD:238020 9/34 (26%)
FN3 149..243 CDD:238020 17/96 (18%)
EGF_MSP1_1 372..407 CDD:403985 8/34 (24%)
LamG 417..567 CDD:238058 38/179 (21%)
EGF_CA 586..628 CDD:238011 17/88 (19%)
LamG 654..791 CDD:238058 32/148 (22%)
EGF_CA 814..846 CDD:238011 15/33 (45%)
Laminin_G_2 886..1011 CDD:396680 34/175 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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