DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33810 and H1f10

DIOPT Version :10

Sequence 1:NP_001027295.1 Gene:His1:CG33810 / 3771879 FlyBaseID:FBgn0053810 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001386008.1 Gene:H1f10 / 500252 RGDID:1565596 Length:192 Species:Rattus norvegicus


Alignment Length:243 Identity:68/243 - (27%)
Similarity:98/243 - (40%) Gaps:65/243 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AAPPATVE---KKVVQKKASGSAG-TKAKKASATPSHPPTQ--QMVDASIKNLKERGGSSLLAIK 72
            |.||.:.:   :|..  ||||||. |:.|:......:.|.:  |:|..:|:.|.|||||||..|.
  Rat     8 ALPPTSADGTARKTA--KASGSAAPTQPKRRKNRKKNQPGKYSQLVVETIRKLGERGGSSLARIY 70

  Fly    73 KYITATYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAE 137
            .........|.|....::|..:::.|.|..|:|.||.||:|||||:                  .
  Rat    71 AEARKVAWFDQQNGRTYLKYSIRALVQNDTLLQVKGTGANGSFKLN------------------R 117

  Fly   138 KKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIKSKPA 202
            ||::         |.:.|:.|..|:...|||:.|                              |
  Rat   118 KKLE---------GSAEKRGASAASSPAPKARTA------------------------------A 143

  Fly   203 ATKAKVTAAKPKAVVAKASKAKPAVSAKPKKTVKKASVSATAKKPKAK 250
            |..|..|.|:|:.........|.|.:|...|.||||:..:..|.||.:
  Rat   144 AAAADRTPARPQPERRAQKSKKAAAAAASTKKVKKAAKPSVPKVPKGR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33810NP_001027295.1 H15 43..130 CDD:238028 29/88 (33%)
H1f10NP_001386008.1 H15 46..119 CDD:238028 28/90 (31%)

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