DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33810 and histh1l3

DIOPT Version :9

Sequence 1:NP_001027295.1 Gene:His1:CG33810 / 3771879 FlyBaseID:FBgn0053810 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_002666950.1 Gene:histh1l3 / 100334868 ZFINID:ZDB-GENE-131121-2 Length:204 Species:Danio rerio


Alignment Length:239 Identity:94/239 - (39%)
Similarity:125/239 - (52%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |:::|.|  .:|..||          ||.|.|   |.|||.     |..:.::..::...|||.|
Zfish     1 MAETAPA--PAPAKAP----------KKRSAS---KPKKAG-----PNVRDLIVKTVTASKERHG 45

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.::| .|  |.:|....:|..:|:.|:||.|:|.||.||||||||:   ||:.:||.
Zfish    46 VSLAALKKALSAGGY--DVEKNNSRVKTAVKALVLNGTLVQPKGTGASGSFKLN---KKQAEPKK 105

  Fly   130 KSKVLSAE-KKVQSKKVASKKIGVSSKK---TAVGAADKKP-KAKKAVATKKTAENKKTEKAKAK 189
            .:|..:|: ||..:||.|:||.....||   |:|..|.|.| ||||..|.||..::.|  |||..
Zfish   106 AAKKTAAKAKKPAAKKPAAKKSPKKVKKPAATSVKKATKSPKKAKKPAAAKKATKSPK--KAKKP 168

  Fly   190 DAKKTGIIKSKPAATKAKVTAAKPKAVVAKASKAKPAVSAKPKK 233
            .|.|      |.|.:..||.|.|||....||:|.|   .|.|||
Zfish   169 AAAK------KAAKSPKKVKAVKPKTAKPKAAKPK---KAAPKK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33810NP_001027295.1 Linker_histone 46..118 CDD:278939 30/72 (42%)
histh1l3XP_002666950.1 Linker_histone 27..97 CDD:278939 30/71 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I11086
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4847
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000079
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11467
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X117
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.960

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