DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adh and hsd17b11

DIOPT Version :10

Sequence 1:NP_001027266.1 Gene:Adh / 3771877 FlyBaseID:FBgn0000055 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001011304.1 Gene:hsd17b11 / 496757 XenbaseID:XB-GENE-1004190 Length:300 Species:Xenopus tropicalis


Alignment Length:273 Identity:61/273 - (22%)
Similarity:99/273 - (36%) Gaps:74/273 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VIFVAGLG-GIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAET 73
            |:.:.|.| |||..|::  :..:|:::::|..| |...:.|......|.....|.|.|.....|.
 Frog    38 VVLITGAGHGIGKITAQ--IFGELESVLVLWDI-NKQGVEETAEKCRKGGAKVYTYVVDCSKREE 99

  Fly    74 TKLLKTIFAQLK----TVDVLINGAGI--------LDDHQIERTIAVNYTGLVNTTTAILDFWDK 126
               :.|...::|    .|.:|||.|||        |.|.|||:...||         .:..||..
 Frog   100 ---INTAANKVKQEVGDVTILINNAGIIFCADVLTLQDQQIEKIFEVN---------ILAHFWTT 152

  Fly   127 RKGGPG------GIICNIGSVTGFNAIYQVPVYSGTKAAVVNFTSSLAK--------------LA 171
            |...|.      |.|..:.|..||..:..:..|..||.|.:.:..:|..              |.
 Frog   153 RAFLPSMLRNNHGHIVTVASSAGFVGVQFMVDYCSTKFAALGYHKALTAELLALGKSGIKTSCLC 217

  Fly   172 PITGVTAYTVNPGITRTTLVHTFNSWLDVEPQ-----------VAEKLLAHPTQPSLA------C 219
            |:...|.:..||.:....:         ::|:           :.:|::..|:..||.      .
 Frog   218 PVFVDTGFVKNPSLRLAPV---------LQPEEVAQTLVDGILINKKMICVPSSVSLVPVLAFFL 273

  Fly   220 AENFVKAIELNQN 232
            .|..:.|:...||
 Frog   274 PERALNALNEFQN 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdhNP_001027266.1 ADH_SDR_c_like 8..247 CDD:187584 61/273 (22%)
hsd17b11NP_001011304.1 17beta-HSDXI-like_SDR_c 38..277 CDD:187598 58/262 (22%)

Return to query results.
Submit another query.