DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4456 and SEN1

DIOPT Version :9

Sequence 1:NP_001027116.1 Gene:CG4456 / 3771872 FlyBaseID:FBgn0001228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_195302.1 Gene:SEN1 / 829730 AraportID:AT4G35770 Length:182 Species:Arabidopsis thaliana


Alignment Length:106 Identity:27/106 - (25%)
Similarity:40/106 - (37%) Gaps:16/106 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IDVRRKEELQQTGFIPASINIPLDELD-----KALNLD-----GSAF-KN----KYGRSKPEKQS 68
            :.||...||.|.|:....:..| ||..     :|:|:.     ||.. ||    :...|...|..
plant    73 VPVRVARELAQAGYRYLDVRTP-DEFSIGHPTRAINVPYMYRVGSGMVKNPSFLRQVSSHFRKHD 136

  Fly    69 PIIFTCRSGNRVLEAEKIAKSQGYSNVVIYKGSWNEWAQKE 109
            .||..|.||.....|.....:.|::.:....|.:..|.:.|
plant   137 EIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4456NP_001027116.1 RHOD_HSP67B2 2..107 CDD:238777 26/102 (25%)
SEN1NP_195302.1 RHOD 64..182 CDD:412175 27/106 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0607
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 45 1.000 Inparanoid score I2670
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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