DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4456 and tstd1

DIOPT Version :10

Sequence 1:NP_001027116.1 Gene:CG4456 / 3771872 FlyBaseID:FBgn0001228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_021328471.1 Gene:tstd1 / 563265 ZFINID:ZDB-GENE-081107-63 Length:117 Species:Danio rerio


Alignment Length:109 Identity:40/109 - (36%)
Similarity:65/109 - (59%) Gaps:2/109 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKALNLDGSAFKNKYGRSKPEKQ 67
            :|..:|.:.......|:|||..||:.: |.||.||:||:..:.:.|:||.:.|::|:|..||...
Zfish     9 SYSDLKSILAKGSAVLVDVRTNEEVAR-GTIPGSIHIPVGNIGQDLSLDAAEFQSKFGVGKPPLD 72

  Fly    68 -SPIIFTCRSGNRVLEAEKIAKSQGYSNVVIYKGSWNEWAQKEG 110
             :.::|.|:.|.|...|.:.|||.|:.|...|.|::.||::|||
Zfish    73 CTELVFFCQLGRRGAAATEKAKSLGFKNARNYAGAYKEWSEKEG 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4456NP_001027116.1 RHOD_HSP67B2 2..107 CDD:238777 37/104 (36%)
tstd1XP_021328471.1 RHOD 9..113 CDD:444705 37/104 (36%)

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