DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33852 and RBM43

DIOPT Version :9

Sequence 1:NP_001027364.1 Gene:His1:CG33852 / 3771803 FlyBaseID:FBgn0053852 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_940959.1 Gene:RBM43 / 375287 HGNCID:24790 Length:357 Species:Homo sapiens


Alignment Length:147 Identity:34/147 - (23%)
Similarity:58/147 - (39%) Gaps:22/147 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ASIKNLKERGGSSLLAIKKYITATYKCDA---QKLAPFIKKYLKSAVVNGKLIQ-----TKGKGA 111
            ||:.|:||    |....:..:.|....|.   |.||..:|.:.:.....|..::     |:.|| 
Human     2 ASVLNVKE----SKAPERTVVVAGLPVDLFSDQLLAVLVKSHFQDIKNEGGDVEDVIYPTRTKG- 61

  Fly   112 SGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKK 176
                 ::....|||  |....|:..:|...::|....::.||.:.:..|  ||...:..|:....
Human    62 -----VAYVIFKEK--KVAENVIRQKKHWLARKTRHAELTVSLRVSHFG--DKIFSSVNAILDLS 117

  Fly   177 TAENKKTEKAKAKDAKK 193
            ....:.|.:...||.||
Human   118 VFGKEVTLETLVKDLKK 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33852NP_001027364.1 Linker_histone 46..118 CDD:278939 16/70 (23%)
RBM43NP_940959.1 RRM_RBM43 15..93 CDD:240990 17/85 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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