DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and Far1

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001272760.1 Gene:Far1 / 67420 MGIID:1914670 Length:515 Species:Mus musculus


Alignment Length:498 Identity:166/498 - (33%)
Similarity:253/498 - (50%) Gaps:33/498 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IISFYKDKTVFITGGTGLLGKVVVEKLLRATD-VKRIYFLVRTKRGEKMEARFESWKKDQVFEVL 68
            |..:|:.|.:.:||.||.||||::|||||:.. |..:|.|||.|.|:..:.|.|.....::|:.|
Mouse     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRL 68

  Fly    69 LNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRAVR 133
            .::||...||:..|:.:...|.|.:||.|:.|:.....|:.|.||:|||.|.|..||.:|..|.|
Mouse    69 RDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATR 133

  Fly   134 LITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSETFEKMAP 196
            .:..||::|:.||.|:|||||::.|....|.|..||.    |||  |::|....:.......:.|
Mouse   134 QLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP----PVDPKKLIDSLEWMDDGLVNDITP 194

  Fly   197 ALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFATAY 261
            .|||..||||.|||||.|.|:|:|...|.|.|.||:|:.:::|||..||:|...|...:..|...
Mouse   195 KLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGK 259

  Fly   262 GFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQNKNGPPPIYAFTPSESNLVTYEDLAG 326
            |.:..:..:....|.:||||..||.::|:    |..|..|:.....:|..|...:|...:.::. 
Mouse   260 GILRTMRASNNALADLVPVDVVVNTSLAA----AWYSGVNRPRNIMVYNCTTGSTNPFHWGEVG- 319

  Fly   327 LCYQNGLEVPNAKMIWYPFTHCTRCPYL---YNIGILFY-----HMLPGYLLDIVLRLKGQKPMM 383
                   :..|......|.....|.||:   .|..:|.|     |.:|..|||:.|||.||||.|
Mouse   320 -------DYLNHSFKMNPLNQVFRHPYVKFCSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWM 377

  Fly   384 IKSYHKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLMDGIR 448
            :|:..::|:.|..|..|:..::..:..|.|.:...::||:|:.||.|:..|:|.||......|.:
Mouse   378 MKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTK 442

  Fly   449 LYLFKDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIW 491
            .|:..:  ....:...::.|.:...:.....|:||.|    ||
Mouse   443 KYVLNE--EMSGLPAARKHLNKLRNIRYGFNTILVIL----IW 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 159/458 (35%)
FAR-N_SDR_e 12..330 CDD:187547 117/320 (37%)
Sterile 363..453 CDD:281068 32/89 (36%)
Far1NP_001272760.1 FAR-N_SDR_e 11..330 CDD:187547 118/334 (35%)
Sterile 371..447 CDD:376978 24/75 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847921
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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