DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and CG12268

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster


Alignment Length:501 Identity:161/501 - (32%)
Similarity:271/501 - (54%) Gaps:11/501 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEIISFYKDKTVFITGGTGLLGKVVVEKLLRA-TDVKRIYFLVRTKRGEKMEARFESWKKDQVFE 66
            |:|..||.:||:.|||.||.:|||:||||||: .|:..||.|:|||:|.....|.|.:.|..:|.
  Fly    13 SDIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIFG 77

  Fly    67 VLLNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRA 131
            .||.|||..::|:..:.||...||||:|..|...||:.|:|:.|.||:|||::||...|::|...
  Fly    78 KLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVVG 142

  Fly   132 VRLITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSETFEKM 194
            ...:.:||::|..|::.|||||::..|....::||.||    .|.:  .:::|..::..|...::
  Fly   143 TLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYP----APQNPFSIIEMVETMDDEALAEI 203

  Fly   195 APALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFAT 259
            .|.|:...||||.|:|||.|.:|......||:.|.||:|:.:...||:.||::|:.|...::...
  Fly   204 TPKLLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIGA 268

  Fly   260 AYGFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKIS--KQNKNGPPPIYAFTPSESNLVTYE 322
            |.|.:..:..|....:.::|||..:|..|....|..|.|  |.||...........|...|:::.
  Fly   269 ARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKALMSWG 333

  Fly   323 DLAGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVLRLKGQKPMMIKSY 387
            |......:...|.|.:..:|||.....:..|.:...::|:|.||.|.:|..|.:.||||.::...
  Fly   334 DSIETGRRFFYETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVFGQKPFLLNVQ 398

  Fly   388 HKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLMDGIRLYLF 452
            .||..|::.|..::.|.:....:...||...:|..::::|:..:..:||:.|.:..:.|:|.|:.
  Fly   399 RKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYISNYIVGMRTYIL 463

  Fly   453 KDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIWLLITNLV 498
            .:  :.|::.:.:::|:|.|:||.:.|.:..:|...|:|..:...|
  Fly   464 GE--SEDTLPQARKVLRRLYILDWVSKVLFFSLSFWFLWTHLDGFV 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 150/454 (33%)
FAR-N_SDR_e 12..330 CDD:187547 114/322 (35%)
Sterile 363..453 CDD:281068 25/89 (28%)
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 150/453 (33%)
FAR-N_SDR_e 22..347 CDD:187547 115/328 (35%)
FAR_C 372..463 CDD:176924 26/90 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466773
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
98.890

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