DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and CG17560

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster


Alignment Length:501 Identity:257/501 - (51%)
Similarity:348/501 - (69%) Gaps:6/501 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSEIISFYKDKTVFITGGTGLLGKVVVEKLLRATDVKRIYFLVRTKRGEKMEARFESWKKDQVF 65
            |.|||..|:|:||||:|||||.||||::|||||.|:|.|||.|:|.|||..:|.|..:|.||.||
  Fly     1 MDSEIQGFFKNKTVFLTGGTGFLGKVIIEKLLRTTEVNRIYSLIRPKRGVPIEDRITTWAKDPVF 65

  Fly    66 EVLLNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTR 130
            ||||...|.||:::.||:|||..||||||::|:|||.||||::|||||:|||:|.|..::.||.|
  Fly    66 EVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAINVR 130

  Fly   131 AVRLITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVDKVLDMHNSVSSETFEKMA 195
            |.||:.||||:|..|.||||||||:|||||..|.||||||||:|..||:|.:...||::..:.|.
  Fly   131 ATRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGELVSNKLLDAME 195

  Fly   196 PALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFATA 260
            |:|:|.|||||||||||.|.||..||..||:.|||||||:||:|||:.||||.|.|.:|:.|..|
  Fly   196 PSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALCFGGA 260

  Fly   261 YGFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQN-KNGPPPIYAFTPSESNLVTYEDL 324
            .|.:.:..|:......:||.|||||||:|.|.:.|:||.|| |...||||||.|||:||::|.:.
  Fly   261 RGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQNGKVTTPPIYAFAPSENNLMSYGNF 325

  Fly   325 --AGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVLRLKGQKPMMIKSY 387
              :.:.|::  .:|..||:||||..|.....|:.:...|.|.||||..|::|||||:||:::..|
  Fly   326 IKSSIIYRD--IIPLTKMLWYPFVLCISTTSLFPLAAFFLHTLPGYFFDLLLRLKGRKPILVDLY 388

  Fly   388 HKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLMDGIRLYLF 452
            .|:|:.:..|.|||..|:..||.||.|:.::||.:::.:::|||:.|:|.:||...|.|:|||:.
  Fly   389 RKIHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFKAAMYGMRLYIG 453

  Fly   453 KDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIWLLITNLV 498
            |:..|.:|:|:|.::..|..||.....:.||.| .|:|...:..||
  Fly   454 KEKPTAESIAKGLKLRMRLKVLHYAFASSLVAL-AGYILYSLARLV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 242/454 (53%)
FAR-N_SDR_e 12..330 CDD:187547 185/320 (58%)
Sterile 363..453 CDD:281068 40/89 (45%)
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 235/441 (53%)
FAR-N_SDR_e 12..327 CDD:187547 185/314 (59%)
Sterile 364..454 CDD:281068 40/89 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466710
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26995
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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