DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and CG17562

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster


Alignment Length:501 Identity:246/501 - (49%)
Similarity:338/501 - (67%) Gaps:5/501 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSEIISFYKDKTVFITGGTGLLGKVVVEKLLRATDVKRIYFLVRTKRGEKMEARFESWKKDQVF 65
            |.::|...::.||||:||.||.|||||:|||||.|:|||||.|:|.|||.:::.|..:|.||.||
  Fly     1 MDTDIQRCFRSKTVFLTGATGFLGKVVIEKLLRTTEVKRIYVLIRPKRGVEIKDRIITWSKDAVF 65

  Fly    66 EVLLNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTR 130
            |:||...|.||:::.||:|||...||||||.|||:||:|||::|||||:|||.|||..|:.||||
  Fly    66 ELLLKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTR 130

  Fly   131 AVRLITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVDKVLDMHNSVSSETFEKMA 195
            |.:|:.|||||||.||:||||||||||||:..|:|.||||||:|..||||.|...:|.|..:.|.
  Fly   131 ATKLMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDELLDNME 195

  Fly   196 PALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFATA 260
            .||:|.|||||||||||.|.||.:||.|||:.|||||:|::..|||:.||:|.:.|.:|::|..|
  Fly   196 QALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAILFGVA 260

  Fly   261 YGFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQ-IAKISKQNKNGPPPIYAFTPSESNLVTYEDL 324
            .|.:.:..::....|.:||||||.|:.:|...: |.:.::......|.||...|.|.|.:|:.:.
  Fly   261 RGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNEMGTQETPLIYQLAPIEQNKITHGEF 325

  Fly   325 AGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVLRLKGQKPMMIKSYHK 389
            ...........|..|||||||.||...|:|:.:...|||.||.|..|:.|.|.|:||.::|.|.|
  Fly   326 IRHALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHTLPAYFFDLALWLSGRKPRLVKVYQK 390

  Fly   390 VHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLMDGIRLYLFKD 454
            :|:.:..|.||:.|::..||:||:.:.|.||.|::.::.|||.:|||||||...:.|:|.:|..:
  Fly   391 IHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALRGMRQFLGNE 455

  Fly   455 LRTPDSVAEGKRILKRFYVLDRILKTVL--VTLFGGFIWLLITNLV 498
            ..||:|:|:||:::||..:|..||:.||  |.|..  :|.|:..||
  Fly   456 APTPESIAQGKKLIKRLKLLHHILQGVLCFVALLA--LWSLVRILV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 227/452 (50%)
FAR-N_SDR_e 12..330 CDD:187547 172/318 (54%)
Sterile 363..453 CDD:281068 39/89 (44%)
CG17562NP_650566.1 PLN02996 10..442 CDD:215538 221/431 (51%)
FAR-N_SDR_e 12..329 CDD:187547 172/316 (54%)
FAR_C 362..452 CDD:176924 40/89 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466708
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26995
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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