DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and far1

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_005174372.1 Gene:far1 / 406829 ZFINID:ZDB-GENE-040426-2908 Length:518 Species:Danio rerio


Alignment Length:510 Identity:159/510 - (31%)
Similarity:252/510 - (49%) Gaps:54/510 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IISFYKDKTVFITGGTGLLGKVVVEKLLRA-TDVKRIYFLVRTKRGEKMEARFESWKKDQVFEVL 68
            |..:|..|.|.|||.||.:|||::|||||: ..||..|.|||.|.|:..:||.......::|:.|
Zfish     4 IPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMINCKLFDRL 68

  Fly    69 LNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRAVR 133
            ....|....|:..|:.|...|:|.:|..|:..|...:.|:.|.||::||.|||:.|:.:|..|.:
Zfish    69 REDQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEPLKDAMQLNVLATQ 133

  Fly   134 LITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSETFEKMAP 196
            .:..||..|:.||.|:|||||::||..:.|:|..||.    |||  |::|....:..:....|.|
Zfish   134 KMVSLAHRMKHLEVFIHVSTAYANCDRELIEEVVYPP----PVDYRKLIDTLEWMDDKLVSLMTP 194

  Fly   197 ALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFATAY 261
            .|:|:.||||||||||.||::|:|...|.:.|.||:|:.:::|||..||:|...|...:..|...
Zfish   195 RLLGERPNTYTYTKALAEQLVQQECGNLNIAIIRPSIVGASWKEPFPGWIDNFNGPSGIFIAAGK 259

  Fly   262 GFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQNKNGPPPIYAFTPSESNLVTYEDLAG 326
            |.:..:..:....|.:||||..:|..:|:    |..|...::..|         .:|:.|.    
Zfish   260 GILRTMRASNNAVADLVPVDVVINTTLAA----AWYSGSQRHARP---------RSLLVYN---- 307

  Fly   327 LCYQNGLEVPNAKMIWY---------PFTHCTRCPYLYNIGILFYHML-----------PGYLLD 371
             |...|:...:...:.|         |.....|.|   |:.:...|::           |.:|.|
Zfish   308 -CTTGGINPFHWGEVEYHVISTFKRNPLEQAFRRP---NVNLTTNHLINQYWIAVSHKAPAFLYD 368

  Fly   372 IVLRLKGQKPMMIKSYHKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNW 436
            :.||:.|::|.|:|:..::|:.|..|..|:..::..:..|...:...|..|:|::||||:..|:|
Zfish   369 LFLRMSGREPRMMKTITRLHKAMMVLEYFTSHSWVWNTDNVTMLMNQMGAEDKKVFNFDVRQLHW 433

  Fly   437 KEYFTCLMDGIRLYLFKDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIW 491
            .||......|.:.|:..:  ....:...::.|.:...:.....||||.|    ||
Zfish   434 AEYMENYCMGTKKYVLNE--ELSGLPAARKHLNKLRNIRYTFNTVLVVL----IW 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 151/470 (32%)
FAR-N_SDR_e 12..330 CDD:187547 115/320 (36%)
Sterile 363..453 CDD:281068 28/100 (28%)
far1XP_005174372.1 FAR-N_SDR_e 11..333 CDD:187547 117/343 (34%)
Sterile 360..450 CDD:308580 27/89 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593284
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

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