DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and Far2

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001334445.1 Gene:Far2 / 330450 MGIID:2687035 Length:515 Species:Mus musculus


Alignment Length:511 Identity:179/511 - (35%)
Similarity:266/511 - (52%) Gaps:49/511 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEIISFYKDKTVFITGGTGLLGKVVVEKLLRAT-DVKRIYFLVRTKRGEKMEARFESWKKDQVFE 66
            |.|.:||.:|::.|||.||.||||::|||.|.: .:|.||.|||.|.|:.::.|.......::||
Mouse     2 SMIAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFE 66

  Fly    67 VLLNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRA 131
            .:....|...||:.|||.|....|..||:.|.:.|.:...::.|.||:|||:..|..||.:|..|
Mouse    67 KVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTA 131

  Fly   132 VRLITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSETFEKM 194
            .:.:..:|.:|..||:|:|:|||||||.:..|.|..||    |||:  |::|....:.....|::
Mouse   132 TQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYP----CPVEPRKIIDSMEWLDDSIIEEI 192

  Fly   195 APALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFAT 259
            .|.|||..||||||||||||.|:|:|:..|.|.|.||:|:.:|::||..||||.|.|...:|.||
Mouse   193 TPKLIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIAT 257

  Fly   260 AYGFVHLLLVNLKVNAPIVPVDYCVNVAIA----SAVQIAKISKQNKNGPPPIYAFTPSESN--- 317
            ..||:..:.......|.::|||..||:.||    :||...|.:.        ||..|....|   
Mouse   258 GKGFLRSIKATPMAVADVIPVDTVVNLTIAVGWYTAVHRPKSTL--------IYHSTSGNLNPCN 314

  Fly   318 --------LVTYEDLAGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVL 374
                    |.|.|.:.   :::....|||     .||......:.:|   ...|.:|..:.|..|
Mouse   315 WYKMGLQVLATIEKIP---FESAFRRPNA-----DFTTSNFTTHYWN---TVSHRVPAIIYDFYL 368

  Fly   375 RLKGQKPMMIKSYHKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEY 439
            ||.|:||.|:|..:::.:.:..|..|...::.....||..:...:|||::.:||||:..|||.||
Mouse   369 RLTGRKPRMLKLMNRLLKTISMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEY 433

  Fly   440 FTCLMDGIRLYLFK-DLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIWLLI 494
            ....:.|::.||.| ||.   .:.:.|:.|:|...:..:..|.|..:    ||.|:
Mouse   434 IENYVLGVKKYLLKEDLA---GIPKAKQHLRRLRNIHYLFNTALFLI----IWRLL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 168/467 (36%)
FAR-N_SDR_e 12..330 CDD:187547 128/335 (38%)
Sterile 363..453 CDD:281068 30/89 (34%)
Far2NP_001334445.1 FAR-N_SDR_e 11..315 CDD:187547 125/315 (40%)
Sterile 357..447 CDD:397244 30/89 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847938
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.840

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