DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and CG4020

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001259264.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster


Alignment Length:501 Identity:151/501 - (30%)
Similarity:256/501 - (51%) Gaps:26/501 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKDKTVFITGGTGLLGKVVVEKLLRA-TDVKRIYFLVRTKRGEKMEARFESWKKDQVFEVLLNKN 72
            ::|:.:|:||.:|.:||.::|||||: ..:.|||.|:|.|:|..:|.|.:...:.:::|.|..:.
  Fly     7 FEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERLRREQ 71

  Fly    73 PLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRAVRLITQ 137
            |.|..|:..|:||.....|||...|...| ..|.::.|.||||||::.|..|:::|||....:.:
  Fly    72 PNARSKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALSTAILLNTRGTHELVK 135

  Fly   138 LAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVDKVLDMHNSVS-SETFEKMAPAL--- 198
            ||.|...|::||||||.:||..|.:::||.||        .:.|...::. :||::  |..|   
  Fly   136 LALEWPKLKAFVHVSTTYSNPGVLEVEERVYP--------PLADWRTTIKLAETYD--AEILDIF 190

  Fly   199 ---IGKF-PNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFAT 259
               .|.| |||||:||:|.|||:.|....||:.||||:|::||.:|||.||.|...|...::.|.
  Fly   191 NLKYGNFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVAC 255

  Fly   260 AYGFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQNKNGPPPIYAFTPSESNL--VTYE 322
            ..|.:.....:..:.|..||.|......|.|..:....|| ::.....:|....:.:|:  :|..
  Fly   256 GVGILRSQNCDPNIVADFVPADIVARTLITSVYKFMGESK-SRAKDSDLYVVNCATANISPITMG 319

  Fly   323 DLAGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVLRLKGQKPMMIKSY 387
            ::..:......:.|..|.:|.|....|.||.|:.:.....|:|...::|.:|||..:||.::|..
  Fly   320 EVIDIGKTFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFLMKLQ 384

  Fly   388 HKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNF-DMSTLNWKEYFTCLMDGIRLYL 451
            .::.....:|..|:...:.....|...:...:...|...|.| ..:.:|:.|:|...:.|.:.:|
  Fly   385 RRIFAAFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRGAKEFL 449

  Fly   452 FKDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIWLLITNL 497
            .|:  :|:|.:..:..:|.|||||.:.:.::.:.....|:..:..|
  Fly   450 LKE--SPESSSAARFRVKIFYVLDFLCRGIVYSFLLRLIFRFLVRL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 140/455 (31%)
FAR-N_SDR_e 12..330 CDD:187547 111/328 (34%)
Sterile 363..453 CDD:281068 20/90 (22%)
CG4020NP_001259264.1 FAR-N_SDR_e 12..333 CDD:187547 111/332 (33%)
FAR_C 359..450 CDD:176924 19/90 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466791
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
98.890

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