DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and Far1

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001011933.1 Gene:Far1 / 293173 RGDID:1306647 Length:515 Species:Rattus norvegicus


Alignment Length:498 Identity:165/498 - (33%)
Similarity:255/498 - (51%) Gaps:33/498 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IISFYKDKTVFITGGTGLLGKVVVEKLLRA-TDVKRIYFLVRTKRGEKMEARFESWKKDQVFEVL 68
            |..:|:.|.:.:||.||.||||::|||||: ..|..:|.|||.|.|:..:.|.|.....::|:.|
  Rat     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRL 68

  Fly    69 LNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRAVR 133
            .::||...:|:..|:.:...|.|.:||.|:.|:.....|:.|.||:|||.|.|..||.:|..|.|
  Rat    69 RDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATR 133

  Fly   134 LITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSETFEKMAP 196
            .:..||::|:.||.|:|||||::.|....|.|..||.    |||  |::|....:.......:.|
  Rat   134 QLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP----PVDPKKLIDSLEWMDDGLVNDITP 194

  Fly   197 ALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFATAY 261
            .|||..||||.|||||.|.|:|:|...|.|.|.||:|:.:::|||..||:|...|...:..|...
  Rat   195 KLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGK 259

  Fly   262 GFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQNKNGPPPIYAFTPSESNLVTYEDLAG 326
            |.:..:..:....|.:||||..||.::|:    |..|..|:.....:|..|...:|...:.::..
  Rat   260 GILRTMRASNNALADLVPVDVVVNTSLAA----AWYSGVNRPRNIMVYNCTTGSTNPFHWGEVGD 320

  Fly   327 LCYQNGLEVPNAKMIWYPFTHCTRCPYL--YNIGILFY------HMLPGYLLDIVLRLKGQKPMM 383
              |.|.....|      |.....|.||:  |:..::.:      |.:|..|||:.|||.||||.|
  Rat   321 --YLNHSFKTN------PLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWM 377

  Fly   384 IKSYHKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLMDGIR 448
            :|:..::|:.|..|..|:..::..:..|.|.:...::||:|:.||.|:..|:|.||......|.:
  Rat   378 MKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTK 442

  Fly   449 LYLFKDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIW 491
            .|:..:  ....:...::.|.:...:.....|:||.|    ||
  Rat   443 KYVLNE--EMSGLPAARKHLNKLRNIRYGFNTILVIL----IW 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 158/458 (34%)
FAR-N_SDR_e 12..330 CDD:187547 116/320 (36%)
Sterile 363..453 CDD:281068 32/89 (36%)
Far1NP_001011933.1 PLN02996 2..446 CDD:215538 158/457 (35%)
FAR-N_SDR_e 11..330 CDD:187547 119/334 (36%)
Sterile 371..447 CDD:281068 24/75 (32%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351498
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

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