DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and fard-1

DIOPT Version :10

Sequence 1:NP_731699.2 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001370741.1 Gene:fard-1 / 180582 WormBaseID:WBGene00022200 Length:536 Species:Caenorhabditis elegans


Alignment Length:491 Identity:146/491 - (29%)
Similarity:256/491 - (52%) Gaps:12/491 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSEIISFYKDKTVFITGGTGLLGKVVVEKLL-RATDVKRIYFLVRTKRGEKMEARFESWKKDQV 64
            |...:...|...:|.:|||||.||||:||||| ...|::.||.::||::|:..:.|......|.:
 Worm     1 MAFSVRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDPL 65

  Fly    65 FEVLLNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINT 129
            |..:..:.|.|.:|:..|.||....:||:...|..::...|.|:||.||:|:|:|.|..||.:|.
 Worm    66 FNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRAAVTMNV 130

  Fly   130 RAVRLITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVDKVLDMHNSVSSETFEKM 194
            ...:.|..|..:::.|:..||||||::||...:..|:.|...::  ..|::|..:.:..||..|:
 Worm   131 IGTKRIIDLCHQIKDLKVLVHVSTAYANCDRFETTEKIYKSPMA--PQKLVDALSWMDDETLTKI 193

  Fly   195 APALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFAT 259
            .|.::|..|||||.||||.|..|:.|||.:||.|.||:|:.:.::.|:.||.|.:.|...:..|.
 Worm   194 TPKILGLRPNTYTLTKALAESTIETEAKDIPVIIIRPSIVGAMWQGPLPGWTDNINGPTGIFAAV 258

  Fly   260 AYGFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQNKNGPPPIYAFTPSESNLVTYEDL 324
            ..|.:..:..:.:..|.|:|||...|:.||||.....|   |....|.|:. :..|.|.:.:..:
 Worm   259 GRGVLTNMCGSSESKADIIPVDIVANMIIASASYRTSI---NTTEIPVIHC-SSGELNPLYWGHI 319

  Fly   325 AGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVLRLKGQKPMMIKSYHK 389
            .....|...:.|..:....|.|:..:...|:.|.....|.:|..:.||..||.|::...:|.|.|
 Worm   320 VLFLEQFYKKYPMEQCFAVPSTYFHKSRSLFLINYYIKHHIPAAISDISARLIGKRKNNVKLYSK 384

  Fly   390 VHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLMDGIRLYLFKD 454
            |.:.:.:|..|:.:.::.:.:...|.::.|:|.:::.:|||:..::|..|....:.||:.:|.|:
 Worm   385 VWKMIETLHFFTTRGWSFNARGLPEFFEKMTPADQKEYNFDVRQVDWNSYLFDYVMGIKKFLLKE 449

  Fly   455 LRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFI 490
              ..:::...:..|.:..:..:::..:   ::.|||
 Worm   450 --NLENLNRSRAHLLKMRIRRQVIAAI---VYAGFI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_731699.2 FAR-N_SDR_e 12..330 CDD:187547 109/318 (34%)
Sterile 362..453 CDD:460779 24/90 (27%)
fard-1NP_001370741.1 FAR-N_SDR_e 13..331 CDD:187547 110/323 (34%)
Sterile 357..448 CDD:460779 24/90 (27%)

Return to query results.
Submit another query.