DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10097 and far1

DIOPT Version :9

Sequence 1:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_017948360.1 Gene:far1 / 100038270 XenbaseID:XB-GENE-973776 Length:518 Species:Xenopus tropicalis


Alignment Length:502 Identity:165/502 - (32%)
Similarity:261/502 - (51%) Gaps:38/502 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IISFYKDKTVFITGGTGLLGKVVVEKLLRA-TDVKRIYFLVRTKRGEKMEARFESWKKDQVFEVL 68
            |..||:.|.|.|||.||.:|||::|||||: .:||.:|.|||.|..:|...|.......::|:.|
 Frog     4 IPEFYRGKNVLITGATGFMGKVLLEKLLRSCPNVKAVYVLVRPKASQKPRERVAEMMSCKLFDRL 68

  Fly    69 LNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTRAVR 133
            .::.|...:|:..||.:...|:|.:|:.|:.:|...:.::.|.||:|||.|.|..|:.:|..|.|
 Frog    69 RDEQPECAQKVIAISSELTQPELDLSKEDQDMLIDCIDIVFHCAATVRFNESLRDAMQLNVIATR 133

  Fly   134 LITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSETFEKMAP 196
            .:..||::::.||.|:|||||::||...||:|..||.    |||  |:::....:.......:.|
 Frog   134 QLLYLAQKIKKLEVFIHVSTAYANCNRKQIEEMVYPP----PVDPKKLIESLEWMDDGLVNDITP 194

  Fly   197 ALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIFATAY 261
            .|||..||||||||||.|.|:|:|...|.:.|.||:|:.:::|||..||:|...|...:..|...
 Frog   195 KLIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGK 259

  Fly   262 GFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQNKNGPPP---IYAFTPSESN-----L 318
            |.:..:..:....|.::|||..||..:|:    |..|..|:...|.   :|..|...:|     .
 Frog   260 GILRTMRASNNAVADLIPVDVVVNTTLAA----AWYSGVNRYSRPRNILVYNCTTGGTNPFHWGE 320

  Fly   319 VTYEDLAGLCYQNGLEV----PNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIVLRLKGQ 379
            |.|..::.. .:|.||.    ||..:        |....||:..|...|..|.:|.|:.||:.|:
 Frog   321 VEYHVISTF-KRNPLEQAFRRPNVNL--------TSNHLLYHYWIAVSHKAPAFLYDVYLRITGR 376

  Fly   380 KPMMIKSYHKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKEYFTCLM 444
            .|.|:|:..::|:.|..|..|:..::..:.:|||.:...:||::|:.||||:..|:|.||.....
 Frog   377 SPRMMKTITRLHKAMMLLEYFTSNSWVWNNENTNMLMSQLSPDDKKAFNFDVRQLHWAEYMENYC 441

  Fly   445 DGIRLYLFKDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIW 491
            .|.:.|:..:  ....:...::.|.:...:.....|:||.|    ||
 Frog   442 MGTKKYVLNE--EMSGLPAARKHLNKLRNIRYGFNTILVVL----IW 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 158/462 (34%)
FAR-N_SDR_e 12..330 CDD:187547 116/328 (35%)
Sterile 363..453 CDD:281068 30/89 (34%)
far1XP_017948360.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8217
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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