DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Argl and ARG4

DIOPT Version :9

Sequence 1:NP_001027234.1 Gene:Argl / 3771738 FlyBaseID:FBgn0032076 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_011882.1 Gene:ARG4 / 856411 SGDID:S000001060 Length:463 Species:Saccharomyces cerevisiae


Alignment Length:453 Identity:217/453 - (47%)
Similarity:304/453 - (67%) Gaps:3/453 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KMWGGRFTEGPHEALHSLNNSLPYDSRLYADDLDASKAYAEALHRAGLINSAEADKLVKNLELLR 74
            |:||||||......:|..|.|||||.::|..||:.:|.|...|.:.||:...|..|:.:.|..::
Yeast     7 KLWGGRFTGETDPLMHLYNASLPYDYKMYKADLEGTKVYTAGLQKLGLLTETELAKIHEGLAEIK 71

  Fly    75 FDWIEGTVKILPGDEDVHTVNERLLVEITG-ELGQRLHTGRSRNDQVVTDMKLWLRKAIRETL-G 137
            .:|........|.|||:||.|||.|.|:.| ::..::|||||||||||||::::.|..:.:|| .
Yeast    72 KEWDADKFVRHPNDEDIHTANERRLGELIGRDIAGKVHTGRSRNDQVVTDLRIYCRDIVNDTLFP 136

  Fly   138 RLSGIIETATRQAELHLGVLMPGYTHLQRAQTVQFSHWLLSHAFALREDGQRLLELRDRANVLPL 202
            .|.|::|...::||..:.|||||||||||||.:::||||.|:|....||.:||.::..|.|..||
Yeast   137 ALKGLVEVLIKRAEGEIDVLMPGYTHLQRAQPIRWSHWLSSYATYFTEDYKRLGQILHRLNQSPL 201

  Fly   203 GSGALAGNPLGIDRLWLAERLGFSGVTANSMHAVGDRDFVVDFIYCCSMVSLHLSRLAEDLIIYS 267
            |:|||||:|.||||.:|||.|||:.|..||:.||.||||:|:.::..::...|:||.|||||||.
Yeast   202 GAGALAGHPYGIDREFLAEGLGFNSVIGNSLVAVSDRDFIVELMFWGTLFMNHISRFAEDLIIYC 266

  Fly   268 TKEFDFIKLADGFSSGSSLMPQKRNPDSLELIRGMAGVITANLTGIMMTIKGTPSTYNKDLQYDK 332
            |.||.||:|:|.:|:||||||||:|.|||||:||.:|.:..:|||.:|::||.||||:||:|.||
Yeast   267 TAEFGFIQLSDAYSTGSSLMPQKKNADSLELLRGKSGRVFGDLTGFLMSLKGIPSTYDKDMQEDK 331

  Fly   333 QFCFQSFDKLSQVLEVTDGVLQTIQVKQESMEAALSTDMLATDWAYYLVKKGVPFRQAHHIIGRV 397
            :..|.....:...:.:..||:.|:.|.:|.|||||:.||||||.|.|||:||||||:.|||.|..
Yeast   332 EPLFDCLTTVEHSMLIATGVISTLTVNKEKMEAALTMDMLATDLADYLVRKGVPFRETHHISGEC 396

  Fly   398 VSEAEKRGVD-ITDLPLGDLQKFSPLFGSDIVAVADYSNNVQQYNAIGGTASSSIVEQLRLLK 459
            |:.||:.|:. |..|.|...||....||.|:....::..:|::.:|.||||.|::::||..||
Yeast   397 VATAERLGLSGIDKLTLEQYQKIDSRFGQDLFETFNFEQSVERRDATGGTAKSAVLKQLDNLK 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArglNP_001027234.1 PRK00855 9..460 CDD:179143 217/453 (48%)
Argininosuccinate_lyase 30..461 CDD:176463 208/433 (48%)
ARG4NP_011882.1 argH 8..463 CDD:129918 216/452 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346585
Domainoid 1 1.000 282 1.000 Domainoid score I256
eggNOG 1 0.900 - - E1_COG0165
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32
Inparanoid 1 1.050 421 1.000 Inparanoid score I286
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60692
OrthoFinder 1 1.000 - - FOG0003623
OrthoInspector 1 1.000 - - oto99323
orthoMCL 1 0.900 - - OOG6_101588
Panther 1 1.100 - - LDO PTHR43814
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R80
SonicParanoid 1 1.000 - - X2496
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.