DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG33861 and h1-3

DIOPT Version :10

Sequence 1:NP_001027379.1 Gene:His1:CG33861 / 3771736 FlyBaseID:FBgn0053861 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001016946.1 Gene:h1-3 / 549700 XenbaseID:XB-GENE-5734164 Length:214 Species:Xenopus tropicalis


Alignment Length:232 Identity:97/232 - (41%)
Similarity:125/232 - (53%) Gaps:28/232 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |:::|....|.|.|.|.|  :||...|||:|:  ||:||    ||.|...:::..::...|||.|
 Frog     1 MAEAAETAPAPPPAEPAA--KKKKQSKKAAGA--TKSKK----PSGPSVSELIVKAVSASKERSG 57

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.| .|  |.:|....:|..||..|....|:|.||.||||||||:   ||:...|.
 Frog    58 VSLAALKKALAAGGY--DVEKNNSRLKLALKGLVSKETLVQVKGSGASGSFKLN---KKQLQSKE 117

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKK-TAVGAADKKPK--AKKAVATKKTAENKKTEKAK--AK 189
            |    :|....::||.|:||...|.|| ..|.||.|.||  .|||....|:....|..|||  ||
 Frog   118 K----AAPAAAKAKKPAAKKAAKSPKKPKKVSAAAKSPKKVVKKAAKAAKSPIKPKAAKAKKVAK 178

  Fly   190 D-AKKTGIIKSKPAATKAKVTAAKPKAVIAKASKAKP 225
            . |||:  :|.|.|.:.||..|||||  :|||.||.|
 Frog   179 SPAKKS--VKPKAAKSPAKAKAAKPK--VAKAKKAAP 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33861NP_001027379.1 H15 43..130 CDD:238028 35/87 (40%)
h1-3NP_001016946.1 H15 35..111 CDD:238028 33/84 (39%)

Return to query results.
Submit another query.