DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33861 and H1f0

DIOPT Version :10

Sequence 1:NP_001027379.1 Gene:His1:CG33861 / 3771736 FlyBaseID:FBgn0053861 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_036710.1 Gene:H1f0 / 24437 RGDID:2777 Length:194 Species:Rattus norvegicus


Alignment Length:259 Identity:91/259 - (35%)
Similarity:117/259 - (45%) Gaps:74/259 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |::::.:|   |.|.|                  .:||.|..:..||....|:.|:|:..|.|.|
  Rat     1 MTENSTST---PAAKP------------------KRAKAAKKSTDHPKYSDMIVAAIQAEKNRAG 44

  Fly    66 SSLLAIKKYITATYK----CDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKD 126
            ||..:|:|||.:.||    .|:|     ||..:|..|..|.|.||||.||||||:|:    |..:
  Rat    45 SSRQSIQKYIKSHYKVGENADSQ-----IKLSIKRLVTTGVLKQTKGVGASGSFRLA----KGDE 100

  Fly   127 PKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDA 191
            ||........:|:|  ||||:.|.....||.|..|..|||||                 ...|.|
  Rat   101 PKRSVAFKKTKKEV--KKVATPKKAAKPKKAASKAPSKKPKA-----------------TPVKKA 146

  Fly   192 KKTGIIKSKPAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKKASVSATAKKPKAKTTAAK 255
            ||      |||||..|  |.|||.|     |.||..::||||        |...|||||::|.:
  Rat   147 KK------KPAATPKK--AKKPKIV-----KVKPVKASKPKK--------AKPVKPKAKSSAKR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33861NP_001027379.1 H15 43..130 CDD:238028 38/90 (42%)
H1f0NP_036710.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 8/45 (18%)
H15 22..106 CDD:238028 38/92 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..194 56/148 (38%)

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