DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33807 and LOC569982

DIOPT Version :9

Sequence 1:NP_001027290.1 Gene:His1:CG33807 / 3771734 FlyBaseID:FBgn0053807 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_017212658.1 Gene:LOC569982 / 569982 -ID:- Length:200 Species:Danio rerio


Alignment Length:233 Identity:90/233 - (38%)
Similarity:118/233 - (50%) Gaps:41/233 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLEERGGSSLLAIK 72
            |:.:|.||.||    |..:||::    .|||||.     |...:::..::...:||.|.||.|:|
Zfish     4 TAPAPAAAAPA----KAPRKKSA----AKAKKAG-----PGVGELIVKAVSASKERSGMSLAALK 55

  Fly    73 KYITAT-YKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSA 136
            |.:.|: |  |.:|....:|..:|..|..|.|.|.||.||||||||:   |::.:||.|      
Zfish    56 KALAASGY--DVEKNNSRVKLAIKGMVTKGVLKQVKGTGASGSFKLN---KQQAEPKKK------ 109

  Fly   137 EKKVQSKKVASKKIGVSSKKTAVGAADKKPK--AKKAVATKKTAENKKTEKAKAKDAKKTGIIKS 199
                .:||.|.|     :||.   ||.||||  |.|..|.||:.:..|...|.||.|.|:.....
Zfish   110 ----PAKKAAPK-----AKKP---AAAKKPKSAAAKKPAAKKSPKKAKKPAAAAKKATKSPKKAK 162

  Fly   200 KPAATKAKVTAAKPKAVVAKASKAKPAVSAKPKKTVKK 237
            ||||.| |...:..||.|||...|||. :|||||...|
Zfish   163 KPAAPK-KAAKSPKKAKVAKPKTAKPK-AAKPKKAAPK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33807NP_001027290.1 Linker_histone 46..118 CDD:278939 28/72 (39%)
LOC569982XP_017212658.1 Linker_histone 30..100 CDD:278939 28/71 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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