DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33807 and LOC100485239

DIOPT Version :10

Sequence 1:NP_001027290.1 Gene:His1:CG33807 / 3771734 FlyBaseID:FBgn0053807 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_031748935.1 Gene:LOC100485239 / 100485239 XenbaseID:XB-GENE-29077695 Length:231 Species:Xenopus tropicalis


Alignment Length:238 Identity:91/238 - (38%)
Similarity:117/238 - (49%) Gaps:27/238 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VATSASPVAAP-PATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLEERGGSSLL 69
            :|.:|:|..|| |...|....:||.....|.||||    |:.|...:::..::...:||.|.||.
 Frog     1 MAETAAPETAPAPPPAEPAAAKKKQPKKGGAKAKK----PAGPSAAELIVTAVSASKERSGVSLA 61

  Fly    70 AIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLS---------ASAKKE 124
            .:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:         |:.||.
 Frog    62 TLKKALAAGGY--DVERNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKQLESKEKAAKKKP 124

  Fly   125 KDPKAKSKVLSAEKKVQSKKVASKKIGVSSK-----KTAVGAADKKPKAKKAVATKKTAENKKTE 184
            ..||||....:|.||........||:..::|     |....|| |.||..||...||.|::...:
 Frog   125 AAPKAKKPAAAAAKKAPKSPKKPKKVSAAAKSPKKVKKPAKAA-KSPKKPKAAKPKKVAKSPAKK 188

  Fly   185 KAKAKDAKKTGIIKSKPAATK--AKVTAAKPKAVVAKASKAKP 225
            .||.|.||.......||.|||  ||..||||||  |||.||.|
 Frog   189 AAKPKAAKSPAKKAPKPKATKSPAKAKAAKPKA--AKAKKAAP 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33807NP_001027290.1 H15 43..130 CDD:238028 34/96 (35%)
LOC100485239XP_031748935.1 Linker_histone 42..106 CDD:459846 23/65 (35%)

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