DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33842 and cpar-1

DIOPT Version :10

Sequence 1:NP_001027348.1 Gene:His3:CG33842 / 3771729 FlyBaseID:FBgn0053842 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_499073.1 Gene:cpar-1 / 186223 WormBaseID:WBGene00010036 Length:261 Species:Caenorhabditis elegans


Alignment Length:147 Identity:30/147 - (20%)
Similarity:57/147 - (38%) Gaps:26/147 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1266 SKEEMLHLFEFDDDDEKSEAVTEISKQNEAGHSNLVE----------QAILWTKKATLSRVGGDK 1320
            :|:.||.|       .|:....|:.|:.....:|::|          ..|||  |...:..|.:.
 Worm   186 AKDGMLDL-------NKAAETLEVQKRRIYDITNVLEGIDLIEKPFKNRILW--KGVDACPGDED 241

  Fly  1321 LMENLLQRHGPNWISSFHEHETLLQENEE--ERLTKEEKDMAWEVYRRALEWEEVQRVP-FSESP 1382
            ...::||....|........:..:::.||  ..|::.||:..|.....    |:::.:| |....
 Worm   242 ADVSVLQAEIENLALEEQALDNQIRQTEERLRDLSENEKNQKWLFVTE----EDIKSLPGFQNQT 302

  Fly  1383 VVPKPSPSTQTEPLPQP 1399
            ::...:|...|..:|.|
 Worm   303 LIAVKAPHGTTLEVPDP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33842NP_001027348.1 PTZ00018 1..136 CDD:185400
cpar-1NP_499073.1 H3 156..261 CDD:128705 17/83 (20%)
Blue background indicates that the domain is not in the aligned region.

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