DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp10 and CG3246

DIOPT Version :10

Sequence 1:NP_001027448.1 Gene:Jhbp10 / 3771724 FlyBaseID:FBgn0053680 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:213 Identity:52/213 - (24%)
Similarity:82/213 - (38%) Gaps:81/213 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 AYQIRPLLVHGNLGD--GFPTSPL-EPLSLDNIELKLS--------------SQFQ-----AVFK 95
            |.|:..:|||....|  |.|..|: :||.:.|::..:.              |:|:     ...|
  Fly    50 AAQVEAMLVHFQQEDPQGLPGVPVPDPLEVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLK 114

  Fly    96 DLEANGGNYTGKYSLHLNLLLPDIKGKGNMQGYCENAK---------------AFVKIRGSRYLR 145
            ::..|||       |.|:.:|  :||:..:..:...|.               ||:.:.     |
  Fly   115 EMRFNGG-------LQLDQML--VKGQYTLSSFFSKANGPFTVVLKNVYAEATAFLAVE-----R 165

  Fly   146 NGK---DYVK----FSKMTTLIDFKDFKLKLANLFSGDRFLGDVGNSLINNNQELYLKDIAPSLE 203
            :|:   |.:|    ||.||  :||::..|           :|.|..|::|.         ||:|.
  Fly   166 DGQLATDRIKIDITFSDMT--MDFQNLGL-----------VGSVFQSVVNG---------APNLV 208

  Fly   204 HGLSKHF-LDVADKILAS 220
            ....|.| |..|||.|.|
  Fly   209 FDAMKPFMLQEADKKLRS 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp10NP_001027448.1 JHBP 35..228 CDD:461956 52/213 (24%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779 52/213 (24%)
Grp7_allergen 260..418 CDD:319052
Blue background indicates that the domain is not in the aligned region.

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