DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or59c and Or71a

DIOPT Version :9

Sequence 1:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_524078.2 Gene:Or71a / 39641 FlyBaseID:FBgn0036474 Length:378 Species:Drosophila melanogaster


Alignment Length:392 Identity:76/392 - (19%)
Similarity:158/392 - (40%) Gaps:68/392 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LLRWIYSLW-----TLTTMWLGIVYLPLGLSLTYVKHFDRFTPTEFLTSLQV-DINCIGNVIKSC 101
            :|:| :.||     ..|..|.......|.:..|::     |....:|.:::. ||....:|:..|
  Fly    15 VLKW-WRLWPRKESVSTPDWTNWQAYALHVPFTFL-----FVLLLWLEAIKSRDIQHTADVLLIC 73

  Fly   102 VTYS-------QMWRFRRMNELI----SSLDKRCVTTTQR----RIFHKMVARVNLIVILFLSTY 151
            :|.:       .:|::..:.:.|    |:.|...:.:.|.    |..|:...||          :
  Fly    74 LTTTALGGKVINIWKYAHVAQGILSEWSTWDLFELRSKQEVDMWRFEHRRFNRV----------F 128

  Fly   152 LGFCFLTLFTSVFAGKAPWQLYNPLVD---------WRKGHWQ----LWIASILEYCVVSIGTMQ 203
            :.:|..:      ||..|:.:..||.|         |....||    .|.|.|.:...:.|....
  Fly   129 MFYCLCS------AGVIPFIVIQPLFDIPNRLPFWMWTPFDWQQPVLFWYAFIYQATTIPIACAC 187

  Fly   204 ELMSDT---YAIVFISLFRCHLAILRDRIANLRQDPKLSEMEHYEQMVACIQDHRTIIQCSQIIR 265
            .:..|.   |.::.:||  | |.:|..|::.|:.|.|    :..|:.:..|..|:.:.|.:..|.
  Fly   188 NVTMDAVNWYLMLHLSL--C-LRMLGQRLSKLQHDDK----DLREKFLELIHLHQRLKQQALSIE 245

  Fly   266 PILSITIFAQFMLVGIDLGLAAISILFFP--NTIWTIMANVSFIVAICTESFPCCMLCEHLIEDS 328
            ..:|.:.|.|.::..:.:.....|:...|  ..:....|.:.::||:..:.....:....:|:.:
  Fly   246 IFISKSTFTQILVSSLIICFTIYSMQMSPVLQDLPGFAAMMQYLVAMIMQVMLPTIYGNAVIDSA 310

  Fly   329 VHVSNALFHSNWITADRSYKSAVLYFLHRAQQPIQFTAGSIFPISVQSNIAVAKFAFTIITIVNQ 393
            ..:::::::|:|...:...:..||.|:....:|:...||..|.|.:.........|::::.::..
  Fly   311 NMLTDSMYNSDWPDMNCRMRRLVLMFMVYLNRPVTLKAGGFFHIGLPLFTKTMNQAYSLLALLLN 375

  Fly   394 MN 395
            ||
  Fly   376 MN 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 64/339 (19%)
Or71aNP_524078.2 7tm_6 68..367 CDD:251636 61/321 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466089
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.