DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or59c and Or56a

DIOPT Version :9

Sequence 1:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:287 Identity:46/287 - (16%)
Similarity:102/287 - (35%) Gaps:102/287 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 FLSTYLGFCFLTLFTSVFAGKAPWQLYN------PLVDWRKGHWQLWIASILEYCVVSIGTMQEL 205
            |:..|||               ||....      ||       |..:|..:::|           
  Fly   197 FVVGYLG---------------PWYALGLGITAIPL-------WHTFITCLMKY----------- 228

  Fly   206 MSDTYAIVFISLFRCHLAILRDRIANL---RQDPKL-------SEMEHYEQMV--ACIQDHRTII 258
                     ::|   .|.||..|:..:   |.:.||       ||:..::..:  ..:::...|.
  Fly   229 ---------VNL---KLQILNKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIR 281

  Fly   259 QCSQIIRPILSITIFAQFMLVGIDLGLAAISILFFPNTIWT--------------IMANVSFIVA 309
            :..|.::.::.:.:.|.|::..:     .|..|||..|:..              :||.:.:|. 
  Fly   282 KFVQELQYLICVPVMADFIIFSV-----LICFLFFALTVGVPSKMDYFFMFIYLFVMAGILWIY- 340

  Fly   310 ICTESFPCCMLCEH-----LIEDSVHVSNALFHSNWITADRSYKSAVLYFLHRAQQPIQFTAGSI 369
                         |     ::|....:|.|.|...|...:...:..:::.:..||:|::..| .:
  Fly   341 -------------HWHATLIVECHDELSLAYFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRA-LL 391

  Fly   370 FPISVQSNIAVAKFAFTIITIVNQMNL 396
            ..:::::.|.:.:.|::...::...:|
  Fly   392 VDLNLRTFIDIGRGAYSYFNLLRSSHL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 44/274 (16%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 44/274 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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