DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or59c and Or49a

DIOPT Version :10

Sequence 1:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_523711.3 Gene:Or49a / 36350 FlyBaseID:FBgn0033727 Length:396 Species:Drosophila melanogaster


Alignment Length:321 Identity:55/321 - (17%)
Similarity:128/321 - (39%) Gaps:70/321 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QMWRFRRMNELISSLDKRCVTTTQRRIFHKMVARVNLIVILFLSTYLGFCFLTL---------FT 161
            :::..:..|:....::|..::.:.|.:.:   ....::|::.|...:..|.:.|         :.
  Fly   109 ELYPHKEQNQRKYEVNKYYLSCSTRNVLY---VYYFVMVVMALEPLVQSCIMYLIGFGKADFTYK 170

  Fly   162 SVFAGKAPWQLYNPLVDWRKGHWQLWIASILEYCV----------VSIGTMQELMSDTYAIVFIS 216
            .:|..:..:....||     |:       :|.|.:          ||:||      |.:.:...|
  Fly   171 RIFPTRLTFDSEKPL-----GY-------VLAYVIDFTYSQFIVNVSLGT------DLWMMCVSS 217

  Fly   217 LFRCHLAILRDRIANLRQDPKLSEMEHYEQMVACIQDHRTIIQCSQIIRPILSITIFAQFMLVGI 281
            ....||..|.:.:|::|..|: :|.:..:.:.:.|:.|:.:|:..:.:..:              
  Fly   218 QISMHLGYLANMLASIRPSPE-TEQQDCDFLASIIKRHQLMIRLQKDVNYV-------------- 267

  Fly   282 DLGLAAISILFFPNTIWTIMA-----------NVSFIVAICTESFPCCMLCEH---LIEDSVHVS 332
             .||...|.||..:.:...||           .:|:::...:.:....::..|   ||:.|.:::
  Fly   268 -FGLLLASNLFTTSCLLCCMAYYTVVEGFNWEGISYMMLFASVAAQFYVVSSHGQMLIDLSTNLA 331

  Fly   333 NALFHSNWITADRSYKSAVLYFLHRAQQPIQFTAGSIFPISVQSNIAVAKFAFTIITIVNQ 393
            .|.|.|.|......||..:|..:.:||:|::.:|..:..||:.:...:....:....::.|
  Fly   332 KAAFESKWYEGSLRYKKEILILMAQAQRPLEISARGVIIISLDTFKILMTITYRFFAVIRQ 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 54/311 (17%)
Or49aNP_523711.3 7tm_6 88..384 CDD:251636 54/311 (17%)

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