DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or59c and Or1a

DIOPT Version :9

Sequence 1:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:66 Identity:16/66 - (24%)
Similarity:28/66 - (42%) Gaps:13/66 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 FMLVGIDLGLAAISILFFPNTIWTIMANVSFIVAIC-TESFPCCMLCEHLIEDS---VHVSNALF 336
            |..:|:||.         |:....::.:......:| |.||..|.:|..::::.   |..|.||.
  Fly    19 FARMGLDLQ---------PDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALM 74

  Fly   337 H 337
            |
  Fly    75 H 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 16/66 (24%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465645
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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