Protein Alignment SkpF and SKP1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_010615.3
• Gene: SKP1 / 851928
• SGDID: S000002736
• Length: 194
• Species: Saccharomyces cerevisiae
• Alignment Length: 186
• Identity: 72/186 - (38%)
• Similarity: 109/186 - (58%)
• Gaps: 34/186 - (18%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLED---------CPVEAENDT----------------- 42
            :.|.|.:||.|..|.:.|:.|..:|..|.|         ...|:::|:
Yeast     6 VVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDE 70

  Fly    43 -----LIPLPNVNSTILKKVLIWAKHHRE-DIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFE 101
                 ::|:|||.|::|:||:.||:|||: :..:|:::::.||..|.  .||.|||.:||..|:|
Yeast    71 DDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVD--SWDREFLKVDQEMLYE 133

  Fly   102 LILAANYLDIPNLLNAACMTVANMIKGRTTEEIRQTFHITNDFSPSEEDLMTMESE 157
            :|||||||:|..||:|.|..||.||:||:.||||:||:|.|||:|.||..:..|:|
Yeast   134 IILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENE 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	53/153 (35%)
		Skp1	112..157	CDD:460222	24/44 (55%)
SKP1	NP_010615.3	SKP1	3..194	CDD:227528	72/186 (39%)