Protein Alignment SkpF and SKP1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_565123.1
• Gene: SKP1 / 843928
• AraportID: AT1G75950
• Length: 160
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 79/155 - (50%)
• Similarity: 102/155 - (65%)
• Gaps: 5/155 - (3%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHREDI 68
            |.|:|||||.||.:...|..|.||..::||..|    |..:|||||.|.||.||:.:.|.|.|..
plant     6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCV----DNGVPLPNVTSKILAKVIEYCKRHVEAA 66

  Fly    69 AEENEE-EAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTTE 132
            |.:.|. |.|.:....:..|||:|:.:||.||||||||||||:|.|||:..|.|||:||||:|.|
plant    67 ASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPE 131

  Fly   133 EIRQTFHITNDFSPSEEDLMTMESE 157
            |||.||:|.|||:|.||:.:..|::
plant   132 EIRTTFNIKNDFTPEEEEEVRRENQ 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	60/122 (49%)
		Skp1	112..157	CDD:460222	26/44 (59%)
SKP1	NP_565123.1	BTB_POZ_SKP1	5..125	CDD:349631	60/122 (49%)
		Skp1	111..158	CDD:460222	26/46 (57%)