Protein Alignment SkpF and SK4

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_564105.1
• Gene: SK4 / 838604
• AraportID: AT1G20140
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 173
• Identity: 74/173 - (42%)
• Similarity: 102/173 - (58%)
• Gaps: 32/173 - (18%)

  Fly     3 VIKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRE 66
            :|.|:|||||.||.:...|..|.|||.::| ||   |:|.  ||||||...||.||:.:.|.|.|
plant     7 MIILKSSDGESFEIEEAVAVKSQTIKHMIEDDC---ADNG--IPLPNVTGAILAKVIEYCKKHVE 66

  Fly    67 DIAE-----------ENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACM 120
            ..||           ||:|         :..||:||:.:||.|||:||||||||:|..||:..|.
plant    67 AAAEAGGDKDFYGSAENDE---------LKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCK 122

  Fly   121 TVANMIKGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQEDE 163
            .||:.::|:|.|::|..|:|.||::|.|      |:||..|::
plant   123 AVADQMRGKTPEQMRAHFNIKNDYTPEE------EAEVRNENK 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	60/134 (45%)
		Skp1	112..157	CDD:460222	16/44 (36%)
SK4	NP_564105.1	BTB_POZ_SKP1	7..128	CDD:349631	60/134 (45%)
		Skp1	115..161	CDD:460222	19/51 (37%)